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Multi-modal Machine learning based pipeline using NLP -Bag-of-Words to identify sequence-based and structural features that distinguish phasiRNAs from other small RNAs

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phasiRNAClassifier - A machine learning repository providing scripts for 1) generating sequence and structural features and 2) classifying reproductive phasiRNAs from other smallRNAs.

version: v1
updated: 02/24/2018
published: New Phytologist | Commentary

Please refer to the wiki page for the overview of this classification pipeline along with the detailed information about scripts, installing dependencies, usage, and output files.

Author:
Parth Patel
pupatel@udel.edu | parth1415@gmail.com

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Multi-modal Machine learning based pipeline using NLP -Bag-of-Words to identify sequence-based and structural features that distinguish phasiRNAs from other small RNAs

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