Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Hamiltonian Monte Carlo (HMC) #6

Open
BradyPlanden opened this issue Jul 14, 2023 · 1 comment · May be fixed by #340
Open

Hamiltonian Monte Carlo (HMC) #6

BradyPlanden opened this issue Jul 14, 2023 · 1 comment · May be fixed by #340
Assignees

Comments

@BradyPlanden
Copy link
Member

BradyPlanden commented Jul 14, 2023

The No-U-Turn Hamiltonian Monte Carlo (HMC) method provide a robust method to capture a posterior distributions with efficient sampling and adaptive step size selection. Capturing the parameter posterior distributions for $\varepsilon = (\hat{y} - y$). This issue surmises the following:

  • Integrate a NUTS implementation from a common, well-supported probablistic library
  • Build corresponding test suite with code coverage
  • Build diagonostics from posterior distribution (i.e. parameter observability) as well as performance-based metrics.
@martinjrobins
Copy link
Contributor

HMC (or NUTS is the varient always used in practice) is great. But for low numbers of parameters a simple method like Adaptive Covariance can be more reliable. Either way, loads of libraries give you NUTS and Adaptive Covariance (like PINTS ;) ) so I think getting both of these will be easy

@BradyPlanden BradyPlanden linked a pull request Dec 13, 2023 that will close this issue
5 tasks
@BradyPlanden BradyPlanden self-assigned this Dec 20, 2023
@BradyPlanden BradyPlanden linked a pull request Jun 3, 2024 that will close this issue
18 tasks
@BradyPlanden BradyPlanden linked a pull request Jun 3, 2024 that will close this issue
18 tasks
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging a pull request may close this issue.

2 participants