Adds plotting methods for monte carlo samplers #409
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Codecov ReportAll modified and coverable lines are covered by tests ✅
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## develop #409 +/- ##
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+ Coverage 99.08% 99.11% +0.03%
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Files 52 55 +3
Lines 3605 3857 +252
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+ Hits 3572 3823 +251
- Misses 33 34 +1 ☔ View full report in Codecov by Sentry. |
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…le with plotting methods.
…posterior_summary
…MAP estimate & initialisation
…ansformations in samplers
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NicolaCourtier
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BradyPlanden
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* feat: initial monte carlo plotting, summary functionality temp commit * plots: update mcmc_summary, remove stale unit tests, align mcmc_example with plotting methods. * adds autocorrelation and ess methods for posterior chains * style: pre-commit fixes * Adds ECM monte carlo identification example, updates and bugfixes to posterior_summary * tests: coverage for PosteriorSummary() * Move data/Tesla_4680 files * fix: lychee, multiprocessing, plotly.go management * Adds coverage for effective sample size, autocorrelation * tests: coverage and removes redundant checks * Update notebook sampler, starting position from optimisation, parallelisation * adds rhat() to PosteriorSummary, updates monte_carlo_ecm example for MAP estimate & initialisation * examples: post-merge fix * tests: adds rhat assertion, updates thevenin sampling for MAP estimate x0. * moves x0 checks, construction to BaseSampler, updates tests, fixes transformations in samplers * adds coverage, updates multi_fitting.py. * fix: x0 in BaseSampler shape, updates sampler & observer tests * style: pre-commit fixes * fix: plot architecture change * adds changelog entry, updates to mcmc_example.py --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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Description
This PR adds plotting methods for the sampling methods constructed in #340.
Issue reference
Fixes #6
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