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Add CodeCov token. #1241

Add CodeCov token.

Add CodeCov token. #1241

Workflow file for this run

defaults:
run:
shell: bash -leo pipefail {0}
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
test:
strategy:
matrix:
os: ['ubuntu-latest']
python: ['3.10', '3.11', '3.12']
pip_opts: ['']
numba_boundscheck: [0]
include:
- os: macos-latest
python: '3.10'
- os: windows-latest
python: '3.10'
- os: ubuntu-latest
python: '3.10'
numba_boundscheck: 1
- os: ubuntu-latest
python: '3.10'
pip_opts: 'numpy<2'
fail-fast: false
runs-on: ${{ matrix.os }}
env:
PYTHON_VERSION: ${{ matrix.python }}
NUMBA_BOUNDSCHECK: ${{ matrix.numba_boundscheck }}
PYTHONFAULTHANDLER: '${{ github.workspace }}/faulthandler.log'
steps:
- name: Checkout Repo
uses: actions/checkout@v4
- uses: mamba-org/setup-micromamba@v2
with:
environment-file: ci/environment.yml
init-shell: >-
bash
cache-environment: true
cache-downloads: true
post-cleanup: 'all'
create-args: >-
python=${{ matrix.python }}
${{ matrix.pip_opts }}
- name: Install package
run: |
pip install -e '.[tests]'
- name: Run tests
run: |
if [ $(python -c 'import numpy as np; print(np.lib.NumpyVersion(np.__version__) >= "2.0.0a1")') = 'True' ]; then
pytest --pyargs sparse --doctest-modules --cov-report=xml:coverage_Numba.xml -n auto -vvv
else
pytest --pyargs sparse --cov-report=xml:coverage_Numba.xml -n auto -vvv
fi
python -c 'import finch'
SPARSE_BACKEND=Finch pytest --pyargs sparse/tests --cov-report=xml:coverage_Finch.xml -n auto -vvv
SPARSE_BACKEND=MLIR pytest --pyargs sparse/mlir_backend --cov-report=xml:coverage_MLIR.xml -n auto -vvv
- uses: codecov/codecov-action@v5
if: always()
with:
token: ${{ secrets.CODECOV_TOKEN }}
files: ./**/coverage*.xml
examples:
runs-on: ubuntu-latest
steps:
- name: Checkout Repo
uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: '3.11'
cache: 'pip'
- name: Build and install Sparse
run: |
pip install -U setuptools wheel
pip install '.[finch]' scipy
- name: Run examples
run: |
source ci/test_examples.sh
notebooks:
runs-on: ubuntu-latest
steps:
- name: Checkout Repo
uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: '3.11'
cache: 'pip'
- name: Build and install Sparse
run: |
pip install -e '.[notebooks]'
- name: Run notebooks
run: |
source ci/test_notebooks.sh
array_api_tests:
strategy:
matrix:
backend: ['Numba', 'Finch']
fail-fast: false
runs-on: ubuntu-latest
steps:
- name: Checkout Repo
uses: actions/checkout@v4
- name: Checkout array-api-tests
uses: actions/checkout@v4
with:
repository: data-apis/array-api-tests
ref: '33f2d2ea2f3dd2b3ceeeb4519d55e08096184149' # Latest commit as of 2024-05-29
submodules: 'true'
path: 'array-api-tests'
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: '3.11'
cache: 'pip'
- name: Install build and test dependencies from PyPI
run: |
pip install pytest-xdist -r array-api-tests/requirements.txt
- name: Build and install Sparse
run: |
pip install '.[finch]'
- name: Run the test suite
env:
ARRAY_API_TESTS_MODULE: sparse
SPARSE_BACKEND: ${{ matrix.backend }}
run: |
cd ${GITHUB_WORKSPACE}/array-api-tests
if [ "${SPARSE_BACKEND}" = "Finch" ]; then
python -c 'import finch'
fi
pytest array_api_tests -v -c pytest.ini -n auto --max-examples=2 --derandomize --disable-deadline -o xfail_strict=True --xfails-file ${GITHUB_WORKSPACE}/ci/${{ matrix.backend }}-array-api-xfails.txt --skips-file ${GITHUB_WORKSPACE}/ci/${{ matrix.backend }}-array-api-skips.txt
on:
# Trigger the workflow on push or pull request,
# but only for the main branch
push:
branches:
- main
- vnext
pull_request:
branches:
- main
- vnext
# Also trigger on page_build, as well as release created events
page_build:
release:
types: # This configuration does not affect the page_build event above
- created