PCA method for telluric corrections #2698
Workflow file for this run
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| name: CI Tests | |
| on: | |
| push: | |
| branches: | |
| - release | |
| - develop | |
| pull_request: | |
| env: | |
| SETUP_XVFB: True # avoid issues if something tries to open a GUI window | |
| jobs: | |
| ci-tests: | |
| name: Tox env ${{ matrix.python }}-${{ matrix.toxenv }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest] | |
| python: ['3.9', '3.10', '3.11'] | |
| toxenv: [test, test-alldeps-cov, test-linetoolsdev, test-gingadev, test-astropydev] | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Install base dependencies | |
| run: | | |
| python -m pip install --upgrade pip tox | |
| - name: Test with tox | |
| run: | | |
| tox -e ${{ matrix.python }}-${{ matrix.toxenv }} | |
| - name: Upload coverage to codecov | |
| if: "contains(matrix.toxenv, '-cov')" | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| token: ${{ secrets.CODECOV }} | |
| file: ./coverage.xml | |
| fail_ci_if_error: true | |
| os-tests: | |
| name: Python ${{ matrix.python }} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| # set this to false for now so windows failures don't prevent macos test from finishing | |
| fail-fast: false | |
| matrix: | |
| os: [windows-latest, macos-latest] | |
| python: ['3.9', '3.10', '3.11'] | |
| toxenv: [test-alldeps] | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Install base dependencies | |
| run: | | |
| python -m pip install --upgrade pip tox | |
| - name: Test with tox | |
| run: | | |
| tox -e ${{ matrix.python }}-${{ matrix.toxenv }} | |
| conda: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Conda environment check | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - name: Install base dependencies | |
| run: | | |
| python -m pip install --upgrade pip tox | |
| - name: Run pypeit tests from environment built with conda | |
| run: | | |
| tox -e conda | |
| codestyle: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Python codestyle check | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.11' | |
| - name: Install base dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| python -m pip install pycodestyle | |
| - name: Check for runtime errors using pycodestyle | |
| run: | | |
| pycodestyle pypeit --count --select=E9 |