convert things to urirefs

pyscal · Aug 15, 2024 · 3772047 · 3772047
1 parent f089c8d
commit 3772047
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Showing 2 changed files with 5 additions and 5 deletions.
diff --git a/atomrdf/graph.py b/atomrdf/graph.py
@@ -1266,9 +1266,9 @@ def iterate_and_rename_triples(self, item):
 
         for triple in triples:
             if triple[0].toPython() in uri_dict.keys():
-                triples[0] = uri_dict[triple[0].toPython()]
+                triples[0] = URIRef(uri_dict[triple[0].toPython()])
             if triple[2].toPython() in uri_dict.keys():
-                triples[2] = uri_dict[triple[2].toPython()]
+                triples[2] = URIRef(uri_dict[triple[2].toPython()])
 
         return URIRef(uri_dict[item.toPython()]), triples
 

diff --git a/atomrdf/structure.py b/atomrdf/structure.py
@@ -2562,10 +2562,10 @@ def copy_defects(self, parent_sample):
         if parent_sample is None:
             return
 
-        parent_material = list([k[2] for k in self.kg.triples((parent_sample, CMSO.hasMaterial, None))])[0]
-        parent_defects = list([x[2] for x in self.kg.triples((parent_material, CMSO.hasDefect, None))])
+        parent_material = list([k[2] for k in self.graph.triples((parent_sample, CMSO.hasMaterial, None))])[0]
+        parent_defects = list([x[2] for x in self.graph.triples((parent_material, CMSO.hasDefect, None))])
 
-        material = list([k[2] for k in self.kg.triples((self.sample, CMSO.hasMaterial, None))])[0]
+        material = list([k[2] for k in self.graph.triples((self.sample, CMSO.hasMaterial, None))])[0]
 
         for defect in parent_defects:
             new_defect, defect_triples = self.graph.iterate_and_rename_triples(defect)