Fixed test pearson metric issue with old pytorch versions #497
Workflow file for this run
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| name: Run unit tests on GPUs | |
| on: | |
| push: | |
| paths: | |
| - "ignite/**" | |
| - "tests/ignite/**" | |
| - "tests/run_gpu_tests.sh" | |
| - "tests/run_code_style.sh" | |
| - "examples/**.py" | |
| - "requirements-dev.txt" | |
| - ".github/workflows/gpu-tests.yml" | |
| workflow_dispatch: | |
| concurrency: | |
| # <workflow_name>-<branch_name>-<true || commit_sha (if branch is protected)> | |
| group: gpu-tests-${{ github.ref_name }}-${{ !(github.ref_protected) || github.sha }} | |
| cancel-in-progress: true | |
| # Cherry-picked from https://github.com/pytorch/test-infra/blob/main/.github/workflows/linux_job.yml | |
| jobs: | |
| gpu-tests: | |
| strategy: | |
| matrix: | |
| pytorch-channel: [pytorch, pytorch-nightly] | |
| fail-fast: false | |
| env: | |
| DOCKER_IMAGE: "pytorch/conda-builder:cuda12.1" | |
| REPOSITORY: ${{ github.repository }} | |
| PR_NUMBER: ${{ github.event.pull_request.number }} | |
| runs-on: linux.8xlarge.nvidia.gpu | |
| timeout-minutes: 45 | |
| steps: | |
| - name: Clean workspace | |
| run: | | |
| echo "::group::Cleanup debug output" | |
| sudo rm -rfv "${GITHUB_WORKSPACE}" | |
| mkdir -p "${GITHUB_WORKSPACE}" | |
| echo "::endgroup::" | |
| - name: Checkout repository (pytorch/test-infra) | |
| uses: actions/checkout@v3 | |
| with: | |
| # Support the use case where we need to checkout someone's fork | |
| repository: pytorch/test-infra | |
| path: test-infra | |
| - name: Setup Linux | |
| uses: ./test-infra/.github/actions/setup-linux | |
| - name: Pull docker image | |
| uses: ./test-infra/.github/actions/pull-docker-image | |
| with: | |
| docker-image: ${{ env.DOCKER_IMAGE }} | |
| - name: Checkout repository (${{ github.repository }}) | |
| uses: actions/checkout@v3 | |
| with: | |
| # Support the use case where we need to checkout someone's fork | |
| repository: ${{ github.repository }} | |
| ref: ${{ github.ref }} | |
| path: ${{ github.repository }} | |
| fetch-depth: 1 | |
| - name: Start Pytorch container | |
| working-directory: ${{ github.repository }} | |
| run: | | |
| docker run --name pthd --gpus=all --rm \ | |
| --cap-add=SYS_PTRACE \ | |
| --detach \ | |
| --ipc=host \ | |
| --security-opt seccomp=unconfined \ | |
| --shm-size=2g \ | |
| --tty \ | |
| --ulimit stack=10485760:83886080 \ | |
| -v $PWD:/work \ | |
| -w /work \ | |
| ${DOCKER_IMAGE} | |
| script=$(cat << EOF | |
| set -xe | |
| nvidia-smi | |
| ls -alh | |
| conda --version | |
| python --version | |
| EOF | |
| ) | |
| docker exec -t pthd /bin/bash -c "${script}" | |
| - name: Install PyTorch and dependencies | |
| continue-on-error: false | |
| run: | | |
| script=$(cat << EOF | |
| set -xe | |
| # Install PyTorch | |
| if [ "${{ matrix.pytorch-channel }}" == "pytorch" ]; then | |
| pip install --upgrade torch torchvision --index-url https://download.pytorch.org/whl/cu121 | |
| else | |
| pip install --upgrade --pre torch torchvision --index-url https://download.pytorch.org/whl/nightly/cu121 | |
| fi | |
| python -c "import torch; print(torch.__version__, ', CUDA is available: ', torch.cuda.is_available()); exit(not torch.cuda.is_available())" | |
| pip list | |
| # Install dependencies | |
| pip install -r requirements-dev.txt | |
| pip install -e . | |
| EOF | |
| ) | |
| docker exec -t pthd /bin/bash -c "${script}" | |
| - name: Run GPU Unit Tests | |
| continue-on-error: false | |
| run: | | |
| script=$(cat << EOF | |
| set -xe | |
| bash tests/run_gpu_tests.sh 2 | |
| EOF | |
| ) | |
| docker exec -t pthd /bin/bash -c "${script}" | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| file: ${{ github.repository }}/coverage.xml | |
| flags: gpu-2 | |
| fail_ci_if_error: false | |
| - name: Run examples in container | |
| continue-on-error: false | |
| run: | | |
| SCRIPT=$(cat << EOF | |
| set -xe | |
| # Install additional example dependencies | |
| pip install fire | |
| # Check training on cifar10, run without backend | |
| ## initial run | |
| CI=1 python examples/cifar10/main.py run --checkpoint_every=200 --stop_iteration=500 | |
| ## resume | |
| CI=1 python examples/cifar10/main.py run --checkpoint_every=200 --num_epochs=7 --resume-from=/tmp/output-cifar10/resnet18_backend-None-1_stop-on-500/training_checkpoint_400.pt | |
| # Check training on cifar10, run with NCCL backend using torchrun | |
| ## initial run | |
| CI=1 torchrun --nproc_per_node=2 examples/cifar10/main.py run --backend=nccl --checkpoint_every=200 --stop_iteration=500 | |
| ## resume | |
| CI=1 torchrun --nproc_per_node=2 examples/cifar10/main.py run --backend=nccl --checkpoint_every=200 --num_epochs=7 --resume-from=/tmp/output-cifar10/resnet18_backend-nccl-2_stop-on-500/training_checkpoint_400.pt | |
| # Check training on cifar10, run with NCCL backend using spawn | |
| ## initial run | |
| CI=1 python -u examples/cifar10/main.py run --backend=nccl --nproc_per_node=2 --checkpoint_every=200 --stop_iteration=500 | |
| ## resume | |
| CI=1 python -u examples/cifar10/main.py run --backend=nccl --nproc_per_node=2 --checkpoint_every=200 --num_epochs=7 --resume-from=/tmp/output-cifar10/resnet18_backend-nccl-2_stop-on-500/training_checkpoint_400.pt | |
| EOF | |
| ) | |
| docker exec -t pthd /bin/bash -c "${script}" | |
| - name: Teardown Linux | |
| if: ${{ always() }} | |
| uses: ./test-infra/.github/actions/teardown-linux |