Add missing package imports, fix indentation

qmarcou · Apr 23, 2024 · bdfafee · bdfafee
1 parent 0426a1d
commit bdfafee
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Showing 2 changed files with 14 additions and 12 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -21,6 +21,7 @@ Depends:
 Imports:
     assertr,
     assertthat,
+    collections,
     data.table,
     doFuture,
     dplyr,
@@ -32,6 +33,7 @@ Imports:
     stats,
     tibble,
     tidyr,
+    tryCatchLog,
     utils
 Encoding: UTF-8
 Roxygen: list(markdown = TRUE)

diff --git a/tests/testthat/test-netidmtpreg_fit.R b/tests/testthat/test-netidmtpreg_fit.R
@@ -59,18 +59,18 @@ testthat::test_that("IDM crude survival model estimates", {
     )
   estimates <- list()
   for (transition in c("11", "12", "13", "23")) {
-    estimates[transition] <- 
-    renewnetTPreg(~1, synth_idm_data,
-      ratetable = NULL,
-      rmap = NULL,
-      time_dep_popvars = NULL,
-      s = s_time,
-      t = 3.0,
-      by = n_ind / 10,
-      trans = transition,
-      link = "logit",
-      R = 1 # Number of bootstraps
-    )
+    estimates[transition] <-
+      renewnetTPreg(~1, synth_idm_data,
+        ratetable = NULL,
+        rmap = NULL,
+        time_dep_popvars = NULL,
+        s = s_time,
+        t = 3.0,
+        by = n_ind / 10,
+        trans = transition,
+        link = "logit",
+        R = 1 # Number of bootstraps
+      )
   }
 
   # Check agreement with generating parameters