v1.3.0 - More databases

• Bugfix for users selecting DECIPHER databsase instead of Silva
• New Databases in the getdb tool

v1.2.5

• New dadaist2-phyloseqMake script, with new sanity checks
• New dadaist2-getdb
• Bugfixes #16

v1.2.4 🍁 Maple release

• Changed default parameters relaxing the quality filtering
• Attachment "data.zip" contains the data directory from the repository

🇨🇦 Released during the #CSM_SCM2022 meeting, hence the nickname

v1.2.1

• Mismatching R1 and R2 files bug fix #15
• Transitioning dada2 with support for >1.18
• Minor improvements

v1.2.0 DADA wrapper

• Introduced an experimental DADA2 wrapper without any upstream/downstream analysis (dadaist2-rundada). foundation for #13 in future release
• preliminary support for a skip-tree parameter in dadaist2 #14
• Transition from dada2 1.18 to 1.22 that will be the recommended version from 1.3.0

Note that 1.2.x will continue to add features in scripts that are not part of the workflow, hence not affecting the workflow at all. When the scripts will be incorporated in the pipeline, this will become 1.3.0.

v1.0.2

added dadaist2-importq2 to generate a PhyloSeq object from Qiime 2 artifacts

v1.0.1

• Minor fix: print version in test suite

v1.0.0

Improved documentation
Minor fixes
GitHub Actions (test)

v0.9.0

General improvements, documentation updated and GitHub actions CI.

v0.8.0 Pooled samples

• --dada-pool to denoise pooled samples