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Add base directory to test reference selection
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Josh Quick
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Sep 20, 2024
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| # artic-inrb-mpox 2500bp v1.0.0 | ||
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| [primalscheme labs](https://labs.primalscheme.com/detail/artic-inrb-mpox/2500/v1.0.0) | ||
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| ## Description | ||
|
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| Clade I genomes were algined to clade I reference and Clade II genomes were algined to clade II reference with squirrel. The two clades were consensus aligned using MAFFT and the alignment was used as the input for primalscheme3. BED files for each clade using primalbedtools | ||
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| ## Overviews | ||
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| ## Details | ||
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| ```json | ||
| { | ||
| "ampliconsize": 2500, | ||
| "schemeversion": "v1.0.0", | ||
| "schemename": "artic-inrb-mpox", | ||
| "primer_bed_md5": "7e75391811c832584cc840f405409d32", | ||
| "reference_fasta_md5": "6fd03a2d6a4a74efbeb1ed99c5c47dc3", | ||
| "status": "draft", | ||
| "citations": [], | ||
| "authors": [ | ||
| "ARTIC network", | ||
| "INRB", | ||
| "Quick Lab" | ||
| ], | ||
| "algorithmversion": "primalscheme3", | ||
| "species": [ | ||
| 10244 | ||
| ], | ||
| "license": "CC BY-SA 4.0", | ||
| "primerclass": "primerschemes", | ||
| "infoschema": "v2.0.0", | ||
| "articbedversion": "v3.0", | ||
| "collections": [ | ||
| "QUICK-LAB", | ||
| "WHOLE-GENOME", | ||
| "ARTIC" | ||
| ], | ||
| "links": { | ||
| "protocols": [], | ||
| "validation": [], | ||
| "homepage": [], | ||
| "vendors": [], | ||
| "misc": [] | ||
| }, | ||
| "description": "Clade I genomes were algined to clade I reference and Clade II genomes were algined to clade II reference with squirrel. The two clades were consensus aligned using MAFFT and the alignment was used as the input for primalscheme3. BED files for each clade using primalbedtools", | ||
| "derivedfrom": null, | ||
| "contactinfo": null | ||
| } | ||
| ``` | ||
|
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||
|
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||
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| ------------------------------------------------------------------------ | ||
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| This work is licensed under a [Creative Commons Attribution-ShareAlike 4.0 International License](http://creativecommons.org/licenses/by-sa/4.0/) | ||
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|  |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,37 @@ | ||
| { | ||
| "ampliconsize": 2500, | ||
| "schemeversion": "v1.0.0", | ||
| "schemename": "artic-inrb-mpox", | ||
| "primer_bed_md5": "7e75391811c832584cc840f405409d32", | ||
| "reference_fasta_md5": "6fd03a2d6a4a74efbeb1ed99c5c47dc3", | ||
| "status": "draft", | ||
| "citations": [], | ||
| "authors": [ | ||
| "ARTIC network", | ||
| "INRB", | ||
| "Quick Lab" | ||
| ], | ||
| "algorithmversion": "primalscheme3", | ||
| "species": [ | ||
| 10244 | ||
| ], | ||
| "license": "CC BY-SA 4.0", | ||
| "primerclass": "primerschemes", | ||
| "infoschema": "v2.0.0", | ||
| "articbedversion": "v3.0", | ||
| "collections": [ | ||
| "QUICK-LAB", | ||
| "WHOLE-GENOME", | ||
| "ARTIC" | ||
| ], | ||
| "links": { | ||
| "protocols": [], | ||
| "validation": [], | ||
| "homepage": [], | ||
| "vendors": [], | ||
| "misc": [] | ||
| }, | ||
| "description": "Clade I genomes were algined to clade I reference and Clade II genomes were algined to clade II reference with squirrel. The two clades were consensus aligned using MAFFT and the alignment was used as the input for primalscheme3. BED files for each clade using primalbedtools", | ||
| "derivedfrom": null, | ||
| "contactinfo": null | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,146 @@ | ||
| #artic-bed-version v3.0 | ||
| KJ642613 91 121 359ba5b8_1_LEFT_1 1 + AAACTCTAGAGGGTAAGAAAAATCAATCGT | ||
| KJ642613 2960 2991 359ba5b8_1_RIGHT_1 1 - ATAATCAATCTAGACTATCGTATTTGCCTCC | ||
| KJ642613 2960 2988 359ba5b8_1_RIGHT_2 1 - GTCAATCTAGACTATCGTATTTGCCTCC | ||
| KJ642613 2691 2713 359ba5b8_2_LEFT_1 2 + CCATTGGATGGTGCATGTGGTG | ||
| KJ642613 5561 5592 359ba5b8_2_RIGHT_1 2 - GTGGTATCCCAGATGAAAATGATGTTAAATT | ||
| KJ642613 5388 5423 359ba5b8_3_LEFT_1 1 + ATGATACTAAATCTATATAACCTGCATAGATAGCG | ||
| KJ642613 8263 8293 359ba5b8_3_RIGHT_1 1 - ACTAGACGATGATACAGATATATGGACTCC | ||
| KJ642613 8123 8156 359ba5b8_4_LEFT_1 2 + AAAATCTAGTTACCTTGAAAATGAATACAGTGG | ||
| KJ642613 10975 11008 359ba5b8_4_RIGHT_1 2 - TTGATGATAATACCTACATTTCTAATCTTCCGT | ||
| KJ642613 10724 10750 359ba5b8_5_LEFT_1 1 + ACATATAGCTAAACCCAGGCATACGT | ||
| KJ642613 13596 13629 359ba5b8_5_RIGHT_1 1 - AAACCTACAAAGAAACGATATGTTAATAATCCG | ||
| KJ642613 13425 13455 359ba5b8_6_LEFT_1 2 + CGAGAAAATCAAATGTCTAAGTTCTAACGG | ||
| KJ642613 16298 16330 359ba5b8_6_RIGHT_1 2 - CTACGGATGCAAACTAAAAATTATTTCGAATG | ||
| KJ642613 15838 15868 359ba5b8_7_LEFT_1 1 + CCTAATACGGAAATAAGACATAAACACGCA | ||
| KJ642613 18658 18691 359ba5b8_7_RIGHT_1 1 - CAGTTTAAAAATGTACGAAATATAGAGGTGAGC | ||
| KJ642613 18508 18537 359ba5b8_8_LEFT_1 2 + GGATGATGATATCACTGTTTCCAGAGTAG | ||
| KJ642613 21227 21261 359ba5b8_8_RIGHT_1 2 - CGTGATATTTTCTATCAATGGGGAAATTATTACG | ||
| KJ642613 21080 21113 359ba5b8_9_LEFT_1 1 + CTACATTGTTTATGGTGATGTTTATCTTCTTCC | ||
| KJ642613 23920 23943 359ba5b8_9_RIGHT_1 1 - TCGGATTCGAAGCCAGGATAGTG | ||
| KJ642613 23791 23817 359ba5b8_10_LEFT_1 2 + GAGAGGCGTATTTCCATCATGATCTG | ||
| KJ642613 26666 26697 359ba5b8_10_RIGHT_1 2 - AGGGAATAAAATGTACAATCTTAAACTCCCT | ||
| KJ642613 26510 26542 359ba5b8_11_LEFT_1 1 + TTCGTCTACATCTATCTTTACATTCTGAAACA | ||
| KJ642613 29384 29410 359ba5b8_11_RIGHT_1 1 - AATTAAGGCTGGATTTGCTAGTCAGG | ||
| KJ642613 29199 29226 359ba5b8_12_LEFT_1 2 + CGTTTCCTTATGAAGATGATGTTTGGC | ||
| KJ642613 32074 32100 359ba5b8_12_RIGHT_1 2 - CGTAATGGGAGGACATTCTGAAACTG | ||
| KJ642613 31941 31967 359ba5b8_13_LEFT_1 1 + AATTCCGCATTTCTACCAACCAAGAA | ||
| KJ642613 34816 34851 359ba5b8_13_RIGHT_1 1 - GTCATCGTTACGACTACTATGAATATATCTGTAAA | ||
| KJ642613 34678 34709 359ba5b8_14_LEFT_1 2 + TTATCTACTGTTCCTAATATCATATGCGGTG | ||
| KJ642613 37542 37563 359ba5b8_14_RIGHT_1 2 - ATTAATCGTGTGTGCGTGGGC | ||
| KJ642613 37406 37439 359ba5b8_15_LEFT_1 1 + CGCCTTTAGAAAAACTTTAGAAGAATATCTCAA | ||
| KJ642613 40281 40303 359ba5b8_15_RIGHT_1 1 - TCCACGTACCCGGGTAATACCT | ||
| KJ642613 40149 40180 359ba5b8_16_LEFT_1 2 + CTGTTAGCAACGGTATATCGAATAGATTACT | ||
| KJ642613 43021 43053 359ba5b8_16_RIGHT_1 2 - GCAAATCGATGCTTTGTTAAAATAGATACTCC | ||
| KJ642613 42861 42893 359ba5b8_17_LEFT_1 1 + AACTTTATCAATACACGTTAATACAAACCCAG | ||
| KJ642613 45719 45746 359ba5b8_17_RIGHT_1 1 - CTCTGTGAAAAAGTTTGTGTTGAGACC | ||
| KJ642613 45580 45613 359ba5b8_18_LEFT_1 2 + TTTAACATATGATATTCGTTCACACTAGGTACT | ||
| KJ642613 48347 48369 359ba5b8_18_RIGHT_1 2 - ACGGCCTACAGATTCTGATGCT | ||
| KJ642613 48213 48240 359ba5b8_19_LEFT_1 1 + CAGTACTCATTAATAACGGTGACAGGG | ||
| KJ642613 51085 51118 359ba5b8_19_RIGHT_1 1 - GGAAAGATATAATCCCTAAACGTTTCTGTTAGA | ||
| KJ642613 50834 50869 359ba5b8_20_LEFT_1 2 + CTTATAGGCGTAAATTATGACTTAGTTCTTAATCC | ||
| KJ642613 53707 53743 359ba5b8_20_RIGHT_1 2 - CGATTGACGTCTGAAATAGTTAATCTATTGGATAAT | ||
| KJ642613 53530 53561 359ba5b8_21_LEFT_1 1 + TGTTTTACGTACCTGGGTATTCAATTACTAC | ||
| KJ642613 56405 56435 359ba5b8_21_RIGHT_1 1 - AGATATTAAAGATAGAAAATGCTCCGTCGC | ||
| KJ642613 56279 56302 359ba5b8_22_LEFT_1 2 + TCCAACGAGTAACATCCGTCTGG | ||
| KJ642613 59128 59160 359ba5b8_22_RIGHT_1 2 - GAAATAATAAACGTCACTGATATCGTTAAGGC | ||
| KJ642613 58935 58966 359ba5b8_23_LEFT_1 1 + ATAGGCATTGATTTTTAAAAGGTATGTAGCC | ||
| KJ642613 61795 61820 359ba5b8_23_RIGHT_1 1 - TTGAAACTTCACCAAGACCTACAGC | ||
| KJ642613 61599 61628 359ba5b8_24_LEFT_1 2 + AGTCTCTCCTTCCAACATAATAAAAGTGG | ||
| KJ642613 64439 64471 359ba5b8_24_RIGHT_1 2 - ACTGTATTAATGCTTTTGATGGTAATTTCTGG | ||
| KJ642613 64301 64328 359ba5b8_25_LEFT_1 1 + GTAGCGTACAAAATTATCGTTCCTGGT | ||
| KJ642613 67174 67201 359ba5b8_25_RIGHT_1 1 - GTTTATATGTGCGGGTTTTCCTAGTGA | ||
| KJ642613 66937 66973 359ba5b8_26_LEFT_1 2 + CCATTTATCATGGAAAAGAATTTACCAGATATCTTC | ||
| KJ642613 69782 69817 359ba5b8_26_RIGHT_1 2 - GATAGTAAGTCGATATTAATATCCTTGACGAATGA | ||
| KJ642613 69577 69605 359ba5b8_27_LEFT_1 1 + CGCGTCTCCGTATCGTATAAATATTTCA | ||
| KJ642613 72436 72466 359ba5b8_27_RIGHT_1 1 - GCATTTCTGCCTTTATTTCTTCTTCCATAA | ||
| KJ642613 72249 72282 359ba5b8_28_LEFT_1 2 + GTATTCATAAAATACGTAAACGGATGGGTAAAA | ||
| KJ642613 75124 75156 359ba5b8_28_RIGHT_1 2 - CGTCGTTCTACAATTTTTGACATAGTTTCAAA | ||
| KJ642613 74993 75024 359ba5b8_29_LEFT_1 1 + CGCAACAATTGTAGATACCATTAATCACTGA | ||
| KJ642613 77868 77901 359ba5b8_29_RIGHT_1 1 - GCTCTAGACCGTGTATAACAAAATCTACAAATT | ||
| KJ642613 77736 77763 359ba5b8_30_LEFT_1 2 + AACTTCTCCGATGATTATTGCTACCAC | ||
| KJ642613 80602 80631 359ba5b8_30_RIGHT_1 2 - GACGAGGATCTATGTATCTAACAGGATCT | ||
| KJ642613 80417 80448 359ba5b8_31_LEFT_1 1 + GAATCTCTTTCAGAGGAATACAGACAATTGA | ||
| KJ642613 83220 83249 359ba5b8_31_RIGHT_1 1 - TTTATCATGACGGACGAACAAATTTATGC | ||
| KJ642613 83096 83119 359ba5b8_32_LEFT_1 2 + GCTTCGTTTACATGGCTCGTACC | ||
| KJ642613 85885 85909 359ba5b8_32_RIGHT_1 2 - GCATTATCCTCAGTGGTGGGTTTG | ||
| KJ642613 85744 85774 359ba5b8_33_LEFT_1 1 + TCTTATCTATCCAGATGAGTCCATGACTTG | ||
| KJ642613 88619 88652 359ba5b8_33_RIGHT_1 1 - GGATTTTATTTTGAAATAGCCAGAATCGAAAAC | ||
| KJ642613 88491 88519 359ba5b8_34_LEFT_1 2 + GCTACCGTTCCTATTCTAGACCAAAAAT | ||
| KJ642613 91366 91398 359ba5b8_34_RIGHT_1 2 - GATTAGTACGAGTTTATCCTTCAATGACAAGA | ||
| KJ642613 91204 91236 359ba5b8_35_LEFT_1 1 + CCGCATTAAATGATGAAACTAAGTCACTATTT | ||
| KJ642613 94079 94111 359ba5b8_35_RIGHT_1 1 - AACGTAATCAATGGCGGTTTAATAAATACTAG | ||
| KJ642613 93882 93913 359ba5b8_36_LEFT_1 2 + AGGCATAGATTACGAATATATAAAAGACGCT | ||
| KJ642613 96755 96780 359ba5b8_36_RIGHT_1 2 - TGGTACACCTACAGTAGCTCACATC | ||
| KJ642613 96572 96597 359ba5b8_37_LEFT_1 1 + TCCTATAGGACCTTCCAACTGTGGA | ||
| KJ642613 99447 99475 359ba5b8_37_RIGHT_1 1 - TGTCTCGTATGTTAGCTTCTACAGTCTT | ||
| KJ642613 99293 99319 359ba5b8_38_LEFT_1 2 + TGTTTTATTAACCGAACGAGGAGACC | ||
| KJ642613 102168 102196 359ba5b8_38_RIGHT_1 2 - ACAGCTTTTTGATGTCAAAGGGTAAAAC | ||
| KJ642613 101930 101963 359ba5b8_39_LEFT_1 1 + GTTTTCGTCAAACATTATGTCTGAATCCTATAC | ||
| KJ642613 104800 104830 359ba5b8_39_RIGHT_1 1 - AGTAGTTAATAAAATAGCGGACACGGATAC | ||
| KJ642613 104597 104630 359ba5b8_40_LEFT_1 2 + TGTATTAACGACGATAAATACGAATATCTGTCT | ||
| KJ642613 107471 107499 359ba5b8_40_RIGHT_1 2 - CGATCCAGTGGATACGGAATTCATTAAT | ||
| KJ642613 107268 107292 359ba5b8_41_LEFT_1 1 + CATAATCGATATAGGCCGCGTGTG | ||
| KJ642613 110128 110153 359ba5b8_41_RIGHT_1 1 - GGTGGTGAAGTTGGGTATTTCTGTT | ||
| KJ642613 109942 109972 359ba5b8_42_LEFT_1 2 + TTTGTGAGTTTTCCTTAAAGTAACAGCTTC | ||
| KJ642613 112797 112826 359ba5b8_42_RIGHT_1 2 - GTCAGGACAAATAGAAACGAGCTATTTCA | ||
| KJ642613 112635 112671 359ba5b8_43_LEFT_1 1 + GACAGAAGAATATGATGATTAGATGGAGAGTATATT | ||
| KJ642613 115510 115531 359ba5b8_43_RIGHT_1 1 - TGGTGCCGTTGTGAAATCGGT | ||
| KJ642613 115375 115404 359ba5b8_44_LEFT_1 2 + GATACTATATCTTCGGTATCTTGACGCAG | ||
| KJ642613 118250 118276 359ba5b8_44_RIGHT_1 2 - TGCTATATAAGGCGCCACGATAATGT | ||
| KJ642613 118110 118142 359ba5b8_45_LEFT_1 1 + CCATAGATCTAAGGATGATGAGAGAAAACTAG | ||
| KJ642613 120915 120950 359ba5b8_45_RIGHT_1 1 - ACTATTTCTATGCGATATCAATCTCTTATTCCTAG | ||
| KJ642613 120706 120733 359ba5b8_46_LEFT_1 2 + ACATGGATTTGGTAACTTTGATAGCCG | ||
| KJ642613 123577 123610 359ba5b8_46_RIGHT_1 2 - TGTCAATAAATGATTGGTATTCTTCTGTTGATC | ||
| KJ642613 123257 123279 359ba5b8_47_LEFT_1 1 + TCCACCGATCTGCGCTAGTAGA | ||
| KJ642613 126121 126153 359ba5b8_47_RIGHT_1 1 - AGATATTACAATATGCTTGATGACTTCTCTGC | ||
| KJ642613 125902 125938 359ba5b8_48_LEFT_1 2 + GAGATAAATATCATCAATATAGAGATTAGAGGAGGG | ||
| KJ642613 128754 128784 359ba5b8_48_RIGHT_1 2 - TCGAAAGAGCGTTCCATAATAGAGTATAAC | ||
| KJ642613 128571 128602 359ba5b8_49_LEFT_1 1 + AGATAGTGATAACGGAATAGACTTTCTGAGA | ||
| KJ642613 131446 131480 359ba5b8_49_RIGHT_1 1 - GGTCATTACCTCTTTAAAGATATTTACAGTGAAC | ||
| KJ642613 131236 131268 359ba5b8_50_LEFT_1 2 + TTATAGACCGTTACATTTCCAATATGTATCGT | ||
| KJ642613 134099 134132 359ba5b8_50_RIGHT_1 2 - TTCACAAAAGATTTTATCCGATAATTCTTCCTC | ||
| KJ642613 133961 133985 359ba5b8_51_LEFT_1 1 + GCCGCATATTCTACTAAGCCGTAC | ||
| KJ642613 136826 136858 359ba5b8_51_RIGHT_1 1 - ACAAGCATTTGTCTAAGCCTATTACTAATACT | ||
| KJ642613 136691 136723 359ba5b8_52_LEFT_1 2 + GGGAACATAATTAGGATCTTCTAATGGATTGT | ||
| KJ642613 139566 139597 359ba5b8_52_RIGHT_1 2 - GATGAAGTTCTATTTAGGTTGGAAAATCACG | ||
| KJ642613 139401 139435 359ba5b8_53_LEFT_1 1 + GGTACAATTCCGTTCCATAAATTTATAATGTTCG | ||
| KJ642613 142267 142292 359ba5b8_53_RIGHT_1 1 - GGCTAACATTACGCATTTTTGCAGT | ||
| KJ642613 142076 142098 359ba5b8_54_LEFT_1 2 + TCCTTATCGGCGGTATCGGTAC | ||
| KJ642613 144886 144912 359ba5b8_54_RIGHT_1 2 - TTCCAGCAACACTATCGTAAATGTGT | ||
| KJ642613 144710 144740 359ba5b8_55_LEFT_1 1 + TCCAGCAAATCTAGTAAATCAACTGATAGC | ||
| KJ642613 147584 147608 359ba5b8_55_RIGHT_1 1 - CCACATGGTCCGTCAAATCTTCTC | ||
| KJ642613 147410 147435 359ba5b8_56_LEFT_1 2 + AGTAGTATGCGGAACCAATAACGGA | ||
| KJ642613 150252 150283 359ba5b8_56_RIGHT_1 2 - AGAAAACCATCAATACTCAACAACTATACGT | ||
| KJ642613 150122 150151 359ba5b8_57_LEFT_1 1 + ACTTATTCTGATTCTTCTAGCCATTTCCG | ||
| KJ642613 152976 153001 359ba5b8_57_RIGHT_1 1 - ACAAGTTCCTGGAGTTAACGAGAGA | ||
| KJ642613 152746 152772 359ba5b8_58_LEFT_1 2 + TGTTTATGAACTCGAATACCGCCTCA | ||
| KJ642613 155615 155636 359ba5b8_58_RIGHT_1 2 - TTTCCCGGTTCGTATACGCCA | ||
| KJ642613 155451 155482 359ba5b8_59_LEFT_1 1 + CCATTGTATGAACGAAGATCTTTTCTCAAAG | ||
| KJ642613 158323 158356 359ba5b8_59_RIGHT_1 1 - TTCCAAATACTTTAGAAAATCATTCGTGTACTG | ||
| KJ642613 158180 158213 359ba5b8_60_LEFT_1 2 + CTGATGATGTTCAAACTAATACATCTGAAACAT | ||
| KJ642613 160936 160965 359ba5b8_60_RIGHT_1 2 - AGAGTTTACCATGGTAATATATTGCAGCA | ||
| KJ642613 160766 160802 359ba5b8_61_LEFT_1 1 + TGATCTAGAAACACTTGGATATTGTATGATTAGATG | ||
| KJ642613 163641 163670 359ba5b8_61_RIGHT_1 1 - AATCTATTACGTGCATTAACATTTGCTCC | ||
| KJ642613 163474 163504 359ba5b8_62_LEFT_1 2 + ACACACCGTTTATCCTATTATGTAAACACG | ||
| KJ642613 166127 166153 359ba5b8_62_RIGHT_1 2 - ACCTCCAGTGATCGTACCAATAGTAG | ||
| KJ642613 165886 165920 359ba5b8_63_LEFT_1 1 + GGTATAATGATGAATGAATTCGATACTGTATGTG | ||
| KJ642613 165887 165920 359ba5b8_63_LEFT_2 1 + GTATAATGATGAATGAATGCGATACTGTATGTG | ||
| KJ642613 168735 168763 359ba5b8_63_RIGHT_1 1 - GACATTCTTTTAGCAATGATTCCACACC | ||
| KJ642613 168373 168403 359ba5b8_64_LEFT_1 2 + CACTCCATGCTAAAACAGAGTTGTAATAGA | ||
| KJ642613 171248 171284 359ba5b8_64_RIGHT_1 2 - CATATTGATATAATCACCAGTTGAATAGAACACATC | ||
| KJ642613 170907 170937 359ba5b8_65_LEFT_1 1 + AGGAATTTACCAGTGATTATCCCTTTTACG | ||
| KJ642613 173779 173815 359ba5b8_65_RIGHT_1 1 - GTTAGTATATTTAAAACATAAATCGGACGATGACTC | ||
| KJ642613 173424 173456 359ba5b8_66_LEFT_1 2 + CCACATCCTTTATTAAATCATGAATGGGAATT | ||
| KJ642613 176236 176261 359ba5b8_66_RIGHT_1 2 - ACCTCGTGCGTTTATATCATTTCCG | ||
| KJ642613 176028 176057 359ba5b8_67_LEFT_1 1 + TCTATGAACGCAGGTATATAGTACACTCC | ||
| KJ642613 178901 178930 359ba5b8_67_RIGHT_1 1 - CAATACGGAATATCTACGTCCATGTCATT | ||
| KJ642613 178747 178777 359ba5b8_68_LEFT_1 2 + AACATACGGATGAAAATGTTTTGATTCTCC | ||
| KJ642613 178747 178777 359ba5b8_68_LEFT_2 2 + ACATACGGATGAAAATGTTTTGATTTCTCC | ||
| KJ642613 181588 181617 359ba5b8_68_RIGHT_1 2 - TGTTTTCAAACATTCAGTGATATTGGTGG | ||
| KJ642613 181208 181235 359ba5b8_69_LEFT_1 1 + AGAACTACAAGTGACTCCAACATATGC | ||
| KJ642613 184083 184107 359ba5b8_69_RIGHT_1 1 - ATCATAGGGACAACCACCAGCTAA | ||
| KJ642613 183667 183696 359ba5b8_70_LEFT_1 2 + ACGATACCAGTTTTAAACAGAATACGGAT | ||
| KJ642613 186534 186573 359ba5b8_70_RIGHT_1 2 - CGATTATATAATGGATGATATGGTAATATGTAACTACCG | ||
| KJ642613 184718 184743 359ba5b8_71_LEFT_1 1 + GGCTAGAGGAATGCCGTTTAGATCA | ||
| KJ642613 187562 187587 359ba5b8_71_RIGHT_1 1 - ACCATCAGAAGCTTTAAGGAGACGA |
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