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Added artic-inrb-mpox/2500/v1.0.1 (#55)
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* Added artic-inrb-mpox/2500/v1.0.1

* updated validate command
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ChrisgKent authored Jan 21, 2025
1 parent 19f93f1 commit b96f224
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2 changes: 1 addition & 1 deletion .github/workflows/validate.yml
Original file line number Diff line number Diff line change
Expand Up @@ -18,4 +18,4 @@ jobs:
python -m pip install --upgrade pip
pip install primal-page
- name: Run primal-page validate
run: primal-page validate directory ./primerschemes
run: primal-page validate all-schemes ./primerschemes
60 changes: 60 additions & 0 deletions primerschemes/artic-inrb-mpox/2500/v1.0.1/README.md
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# artic-inrb-mpox 2500bp v1.0.1

[primalscheme labs](https://labs.primalscheme.com/detail/artic-inrb-mpox/2500/v1.0.1)

## Description

A rebalanced version of artic-inrb-mpox/2500/v1.0.0

## Overviews

## Details

```json
{
"ampliconsize": 2500,
"schemeversion": "v1.0.1",
"schemename": "artic-inrb-mpox",
"primer_bed_md5": "cd8a4ef1c4ab66b4e4cae8f0abc3f2d2",
"reference_fasta_md5": "7ca540c38981c844710721e5165d2b77",
"status": "draft",
"citations": [],
"authors": [
"ARTIC network",
"INRB",
"Quick Lab"
],
"algorithmversion": "primalscheme3",
"species": [
10244
],
"license": "CC BY-SA 4.0",
"primerclass": "primerschemes",
"infoschema": "v2.1.0",
"articbedversion": "v3.0",
"collections": [
"ARTIC",
"WHOLE-GENOME",
"QUICK-LAB"
],
"links": {
"protocols": [],
"validation": [],
"homepage": [],
"vendors": [],
"misc": []
},
"refselect": null,
"description": "A rebalanced version of artic-inrb-mpox/2500/v1.0.0",
"derivedfrom": "artic-inrb-mpox/2500/v1.0.0",
"contactinfo": null
}
```



------------------------------------------------------------------------

This work is licensed under a [Creative Commons Attribution-ShareAlike 4.0 International License](http://creativecommons.org/licenses/by-sa/4.0/)

![](https://i.creativecommons.org/l/by-sa/4.0/88x31.png)
38 changes: 38 additions & 0 deletions primerschemes/artic-inrb-mpox/2500/v1.0.1/info.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,38 @@
{
"ampliconsize": 2500,
"schemeversion": "v1.0.1",
"schemename": "artic-inrb-mpox",
"primer_bed_md5": "cd8a4ef1c4ab66b4e4cae8f0abc3f2d2",
"reference_fasta_md5": "7ca540c38981c844710721e5165d2b77",
"status": "draft",
"citations": [],
"authors": [
"ARTIC network",
"INRB",
"Quick Lab"
],
"algorithmversion": "primalscheme3",
"species": [
10244
],
"license": "CC BY-SA 4.0",
"primerclass": "primerschemes",
"infoschema": "v2.1.0",
"articbedversion": "v3.0",
"collections": [
"ARTIC",
"WHOLE-GENOME",
"QUICK-LAB"
],
"links": {
"protocols": [],
"validation": [],
"homepage": [],
"vendors": [],
"misc": []
},
"refselect": null,
"description": "A rebalanced version of artic-inrb-mpox/2500/v1.0.0",
"derivedfrom": "artic-inrb-mpox/2500/v1.0.0",
"contactinfo": null
}
148 changes: 148 additions & 0 deletions primerschemes/artic-inrb-mpox/2500/v1.0.1/primer.bed
Original file line number Diff line number Diff line change
@@ -0,0 +1,148 @@
#artic-bed-version v3.0
KJ642613.1_masked 133 158 2o0fvmwf_1_LEFT_1 1 + CGTGAGTAGTGTCCCCTACATGGAT 1.39
KJ642613.1_masked 136 158 2o0fvmwf_1_LEFT_2 1 + GAGCAGTGTCCCCTACATGGAT 1.39
KJ642613.1_masked 135 158 2o0fvmwf_1_LEFT_3 1 + TGAGCAGTGTTCCCTACATGGAT 1.39
KJ642613.1_masked 2749 2780 359ba5b8_1_RIGHT_1 1 - ATAATCAATCTAGACTATCGTATTTGCCTCC 1.39
KJ642613.1_masked 2749 2777 359ba5b8_1_RIGHT_2 1 - GTCAATCTAGACTATCGTATTTGCCTCC 1.39
KJ642613.1_masked 2480 2502 359ba5b8_2_LEFT_1 2 + CCATTGGATGGTGCATGTGGTG 1.69
KJ642613.1_masked 5350 5381 359ba5b8_2_RIGHT_1 2 - GTGGTATCCCAGATGAAAATGATGTTAAATT 1.69
KJ642613.1_masked 5177 5212 359ba5b8_3_LEFT_1 1 + ATGATACTAAATCTATATAACCTGCATAGATAGCG 2.57
KJ642613.1_masked 8052 8082 359ba5b8_3_RIGHT_1 1 - ACTAGACGATGATACAGATATATGGACTCC 2.57
KJ642613.1_masked 7912 7945 359ba5b8_4_LEFT_1 2 + AAAATCTAGTTACCTTGAAAATGAATACAGTGG 2.77
KJ642613.1_masked 10804 10837 359ba5b8_4_RIGHT_1 2 - TTGATGATAATACCTACATTTCTAATCTTCCGT 2.77
KJ642613.1_masked 10553 10579 359ba5b8_5_LEFT_1 1 + ACATATAGCTAAACCCAGGCATACGT 1.74
KJ642613.1_masked 13430 13463 359ba5b8_5_RIGHT_1 1 - AAACCTACAAAGAAACGATATGTTAATAATCCG 1.74
KJ642613.1_masked 13259 13289 359ba5b8_6_LEFT_1 2 + CGAGAAAATCAAATGTCTAAGTTCTAACGG 1.73
KJ642613.1_masked 16132 16164 359ba5b8_6_RIGHT_1 2 - CTACGGATGCAAACTAAAAATTATTTCGAATG 1.73
KJ642613.1_masked 15672 15702 359ba5b8_7_LEFT_1 1 + CCTAATACGGAAATAAGACATAAACACGCA 1.37
KJ642613.1_masked 18492 18525 359ba5b8_7_RIGHT_1 1 - CAGTTTAAAAATGTACGAAATATAGAGGTGAGC 1.37
KJ642613.1_masked 18342 18371 359ba5b8_8_LEFT_1 2 + GGATGATGATATCACTGTTTCCAGAGTAG 2.51
KJ642613.1_masked 21061 21095 359ba5b8_8_RIGHT_1 2 - CGTGATATTTTCTATCAATGGGGAAATTATTACG 2.51
KJ642613.1_masked 20914 20947 359ba5b8_9_LEFT_1 1 + CTACATTGTTTATGGTGATGTTTATCTTCTTCC 1.42
KJ642613.1_masked 23755 23778 359ba5b8_9_RIGHT_1 1 - TCGGATTCGAAGCCAGGATAGTG 1.42
KJ642613.1_masked 23626 23652 359ba5b8_10_LEFT_1 2 + GAGAGGCGTATTTCCATCATGATCTG 1.59
KJ642613.1_masked 26501 26532 359ba5b8_10_RIGHT_1 2 - AGGGAATAAAATGTACAATCTTAAACTCCCT 1.59
KJ642613.1_masked 26345 26377 359ba5b8_11_LEFT_1 1 + TTCGTCTACATCTATCTTTACATTCTGAAACA 1.79
KJ642613.1_masked 29220 29246 359ba5b8_11_RIGHT_1 1 - AATTAAGGCTGGATTTGCTAGTCAGG 1.79
KJ642613.1_masked 29035 29062 359ba5b8_12_LEFT_1 2 + CGTTTCCTTATGAAGATGATGTTTGGC 1.5
KJ642613.1_masked 31910 31936 359ba5b8_12_RIGHT_1 2 - CGTAATGGGAGGACATTCTGAAACTG 1.5
KJ642613.1_masked 31777 31803 359ba5b8_13_LEFT_1 1 + AATTCCGCATTTCTACCAACCAAGAA 1.48
KJ642613.1_masked 34652 34687 359ba5b8_13_RIGHT_1 1 - GTCATCGTTACGACTACTATGAATATATCTGTAAA 1.48
KJ642613.1_masked 34514 34545 359ba5b8_14_LEFT_1 2 + TTATCTACTGTTCCTAATATCATATGCGGTG 2.52
KJ642613.1_masked 37378 37399 359ba5b8_14_RIGHT_1 2 - ATTAATCGTGTGTGCGTGGGC 2.52
KJ642613.1_masked 37242 37275 359ba5b8_15_LEFT_1 1 + CGCCTTTAGAAAAACTTTAGAAGAATATCTCAA 1.27
KJ642613.1_masked 40117 40139 359ba5b8_15_RIGHT_1 1 - TCCACGTACCCGGGTAATACCT 1.27
KJ642613.1_masked 39985 40016 359ba5b8_16_LEFT_1 2 + CTGTTAGCAACGGTATATCGAATAGATTACT 1.91
KJ642613.1_masked 42857 42889 359ba5b8_16_RIGHT_1 2 - GCAAATCGATGCTTTGTTAAAATAGATACTCC 1.91
KJ642613.1_masked 42697 42729 359ba5b8_17_LEFT_1 1 + AACTTTATCAATACACGTTAATACAAACCCAG 1.68
KJ642613.1_masked 45556 45583 359ba5b8_17_RIGHT_1 1 - CTCTGTGAAAAAGTTTGTGTTGAGACC 1.68
KJ642613.1_masked 45417 45450 359ba5b8_18_LEFT_1 2 + TTTAACATATGATATTCGTTCACACTAGGTACT 1.4
KJ642613.1_masked 48184 48206 359ba5b8_18_RIGHT_1 2 - ACGGCCTACAGATTCTGATGCT 1.4
KJ642613.1_masked 48050 48077 359ba5b8_19_LEFT_1 1 + CAGTACTCATTAATAACGGTGACAGGG 1.75
KJ642613.1_masked 50923 50956 359ba5b8_19_RIGHT_1 1 - GGAAAGATATAATCCCTAAACGTTTCTGTTAGA 1.75
KJ642613.1_masked 50672 50707 359ba5b8_20_LEFT_1 2 + CTTATAGGCGTAAATTATGACTTAGTTCTTAATCC 1.74
KJ642613.1_masked 53545 53581 359ba5b8_20_RIGHT_1 2 - CGATTGACGTCTGAAATAGTTAATCTATTGGATAAT 1.74
KJ642613.1_masked 53368 53399 359ba5b8_21_LEFT_1 1 + TGTTTTACGTACCTGGGTATTCAATTACTAC 1.27
KJ642613.1_masked 56243 56273 359ba5b8_21_RIGHT_1 1 - AGATATTAAAGATAGAAAATGCTCCGTCGC 1.27
KJ642613.1_masked 56117 56140 359ba5b8_22_LEFT_1 2 + TCCAACGAGTAACATCCGTCTGG 1.49
KJ642613.1_masked 58966 58998 359ba5b8_22_RIGHT_1 2 - GAAATAATAAACGTCACTGATATCGTTAAGGC 1.49
KJ642613.1_masked 58773 58804 359ba5b8_23_LEFT_1 1 + ATAGGCATTGATTTTTAAAAGGTATGTAGCC 1.21
KJ642613.1_masked 61633 61658 359ba5b8_23_RIGHT_1 1 - TTGAAACTTCACCAAGACCTACAGC 1.21
KJ642613.1_masked 61437 61466 359ba5b8_24_LEFT_1 2 + AGTCTCTCCTTCCAACATAATAAAAGTGG 2.35
KJ642613.1_masked 64277 64309 359ba5b8_24_RIGHT_1 2 - ACTGTATTAATGCTTTTGATGGTAATTTCTGG 2.35
KJ642613.1_masked 64139 64166 359ba5b8_25_LEFT_1 1 + GTAGCGTACAAAATTATCGTTCCTGGT 1.43
KJ642613.1_masked 67012 67039 359ba5b8_25_RIGHT_1 1 - GTTTATATGTGCGGGTTTTCCTAGTGA 1.43
KJ642613.1_masked 66775 66811 359ba5b8_26_LEFT_1 2 + CCATTTATCATGGAAAAGAATTTACCAGATATCTTC 1.48
KJ642613.1_masked 69620 69655 359ba5b8_26_RIGHT_1 2 - GATAGTAAGTCGATATTAATATCCTTGACGAATGA 1.48
KJ642613.1_masked 69415 69443 359ba5b8_27_LEFT_1 1 + CGCGTCTCCGTATCGTATAAATATTTCA 1.71
KJ642613.1_masked 72274 72304 359ba5b8_27_RIGHT_1 1 - GCATTTCTGCCTTTATTTCTTCTTCCATAA 1.71
KJ642613.1_masked 72087 72120 359ba5b8_28_LEFT_1 2 + GTATTCATAAAATACGTAAACGGATGGGTAAAA 1.38
KJ642613.1_masked 74963 74995 359ba5b8_28_RIGHT_1 2 - CGTCGTTCTACAATTTTTGACATAGTTTCAAA 1.38
KJ642613.1_masked 74832 74863 359ba5b8_29_LEFT_1 1 + CGCAACAATTGTAGATACCATTAATCACTGA 1.68
KJ642613.1_masked 77707 77740 359ba5b8_29_RIGHT_1 1 - GCTCTAGACCGTGTATAACAAAATCTACAAATT 1.68
KJ642613.1_masked 77575 77602 359ba5b8_30_LEFT_1 2 + AACTTCTCCGATGATTATTGCTACCAC 1.27
KJ642613.1_masked 80441 80470 359ba5b8_30_RIGHT_1 2 - GACGAGGATCTATGTATCTAACAGGATCT 1.27
KJ642613.1_masked 80256 80287 359ba5b8_31_LEFT_1 1 + GAATCTCTTTCAGAGGAATACAGACAATTGA 2.22
KJ642613.1_masked 83059 83088 359ba5b8_31_RIGHT_1 1 - TTTATCATGACGGACGAACAAATTTATGC 2.22
KJ642613.1_masked 82935 82958 359ba5b8_32_LEFT_1 2 + GCTTCGTTTACATGGCTCGTACC 1.32
KJ642613.1_masked 85725 85749 359ba5b8_32_RIGHT_1 2 - GCATTATCCTCAGTGGTGGGTTTG 1.32
KJ642613.1_masked 85584 85614 359ba5b8_33_LEFT_1 1 + TCTTATCTATCCAGATGAGTCCATGACTTG 2.16
KJ642613.1_masked 88459 88492 359ba5b8_33_RIGHT_1 1 - GGATTTTATTTTGAAATAGCCAGAATCGAAAAC 2.16
KJ642613.1_masked 88331 88359 359ba5b8_34_LEFT_1 2 + GCTACCGTTCCTATTCTAGACCAAAAAT 2.17
KJ642613.1_masked 91206 91238 359ba5b8_34_RIGHT_1 2 - GATTAGTACGAGTTTATCCTTCAATGACAAGA 2.17
KJ642613.1_masked 91044 91076 359ba5b8_35_LEFT_1 1 + CCGCATTAAATGATGAAACTAAGTCACTATTT 1.62
KJ642613.1_masked 93919 93951 359ba5b8_35_RIGHT_1 1 - AACGTAATCAATGGCGGTTTAATAAATACTAG 1.62
KJ642613.1_masked 93722 93753 359ba5b8_36_LEFT_1 2 + AGGCATAGATTACGAATATATAAAAGACGCT 1.56
KJ642613.1_masked 96595 96620 359ba5b8_36_RIGHT_1 2 - TGGTACACCTACAGTAGCTCACATC 1.56
KJ642613.1_masked 96412 96437 359ba5b8_37_LEFT_1 1 + TCCTATAGGACCTTCCAACTGTGGA 1.42
KJ642613.1_masked 99287 99315 359ba5b8_37_RIGHT_1 1 - TGTCTCGTATGTTAGCTTCTACAGTCTT 1.42
KJ642613.1_masked 99133 99159 359ba5b8_38_LEFT_1 2 + TGTTTTATTAACCGAACGAGGAGACC 1.66
KJ642613.1_masked 102008 102036 359ba5b8_38_RIGHT_1 2 - ACAGCTTTTTGATGTCAAAGGGTAAAAC 1.66
KJ642613.1_masked 101770 101803 359ba5b8_39_LEFT_1 1 + GTTTTCGTCAAACATTATGTCTGAATCCTATAC 1.71
KJ642613.1_masked 104640 104670 359ba5b8_39_RIGHT_1 1 - AGTAGTTAATAAAATAGCGGACACGGATAC 1.71
KJ642613.1_masked 104437 104470 359ba5b8_40_LEFT_1 2 + TGTATTAACGACGATAAATACGAATATCTGTCT 2.44
KJ642613.1_masked 107311 107339 359ba5b8_40_RIGHT_1 2 - CGATCCAGTGGATACGGAATTCATTAAT 2.44
KJ642613.1_masked 107108 107132 359ba5b8_41_LEFT_1 1 + CATAATCGATATAGGCCGCGTGTG 1.26
KJ642613.1_masked 109968 109993 359ba5b8_41_RIGHT_1 1 - GGTGGTGAAGTTGGGTATTTCTGTT 1.26
KJ642613.1_masked 109782 109812 359ba5b8_42_LEFT_1 2 + TTTGTGAGTTTTCCTTAAAGTAACAGCTTC 1.31
KJ642613.1_masked 112637 112666 359ba5b8_42_RIGHT_1 2 - GTCAGGACAAATAGAAACGAGCTATTTCA 1.31
KJ642613.1_masked 112475 112511 359ba5b8_43_LEFT_1 1 + GACAGAAGAATATGATGATTAGATGGAGAGTATATT 1.53
KJ642613.1_masked 115350 115371 359ba5b8_43_RIGHT_1 1 - TGGTGCCGTTGTGAAATCGGT 1.53
KJ642613.1_masked 115215 115244 359ba5b8_44_LEFT_1 2 + GATACTATATCTTCGGTATCTTGACGCAG 1.5
KJ642613.1_masked 118090 118116 359ba5b8_44_RIGHT_1 2 - TGCTATATAAGGCGCCACGATAATGT 1.5
KJ642613.1_masked 117950 117982 359ba5b8_45_LEFT_1 1 + CCATAGATCTAAGGATGATGAGAGAAAACTAG 2.82
KJ642613.1_masked 120755 120790 359ba5b8_45_RIGHT_1 1 - ACTATTTCTATGCGATATCAATCTCTTATTCCTAG 2.82
KJ642613.1_masked 120546 120573 359ba5b8_46_LEFT_1 2 + ACATGGATTTGGTAACTTTGATAGCCG 2.02
KJ642613.1_masked 123417 123450 359ba5b8_46_RIGHT_1 2 - TGTCAATAAATGATTGGTATTCTTCTGTTGATC 2.02
KJ642613.1_masked 123097 123119 359ba5b8_47_LEFT_1 1 + TCCACCGATCTGCGCTAGTAGA 1.53
KJ642613.1_masked 125961 125993 359ba5b8_47_RIGHT_1 1 - AGATATTACAATATGCTTGATGACTTCTCTGC 1.53
KJ642613.1_masked 125742 125778 359ba5b8_48_LEFT_1 2 + GAGATAAATATCATCAATATAGAGATTAGAGGAGGG 2.85
KJ642613.1_masked 128594 128624 359ba5b8_48_RIGHT_1 2 - TCGAAAGAGCGTTCCATAATAGAGTATAAC 2.85
KJ642613.1_masked 128411 128442 359ba5b8_49_LEFT_1 1 + AGATAGTGATAACGGAATAGACTTTCTGAGA 2.27
KJ642613.1_masked 131286 131320 359ba5b8_49_RIGHT_1 1 - GGTCATTACCTCTTTAAAGATATTTACAGTGAAC 2.27
KJ642613.1_masked 131076 131108 359ba5b8_50_LEFT_1 2 + TTATAGACCGTTACATTTCCAATATGTATCGT 4.89
KJ642613.1_masked 133939 133972 359ba5b8_50_RIGHT_1 2 - TTCACAAAAGATTTTATCCGATAATTCTTCCTC 4.89
KJ642613.1_masked 133801 133825 359ba5b8_51_LEFT_1 1 + GCCGCATATTCTACTAAGCCGTAC 1.43
KJ642613.1_masked 136666 136698 359ba5b8_51_RIGHT_1 1 - ACAAGCATTTGTCTAAGCCTATTACTAATACT 1.43
KJ642613.1_masked 136531 136563 359ba5b8_52_LEFT_1 2 + GGGAACATAATTAGGATCTTCTAATGGATTGT 1.81
KJ642613.1_masked 139406 139437 359ba5b8_52_RIGHT_1 2 - GATGAAGTTCTATTTAGGTTGGAAAATCACG 1.81
KJ642613.1_masked 139241 139275 359ba5b8_53_LEFT_1 1 + GGTACAATTCCGTTCCATAAATTTATAATGTTCG 1.9
KJ642613.1_masked 142116 142141 359ba5b8_53_RIGHT_1 1 - GGCTAACATTACGCATTTTTGCAGT 1.9
KJ642613.1_masked 141925 141947 359ba5b8_54_LEFT_1 2 + TCCTTATCGGCGGTATCGGTAC 1.37
KJ642613.1_masked 144735 144761 359ba5b8_54_RIGHT_1 2 - TTCCAGCAACACTATCGTAAATGTGT 1.37
KJ642613.1_masked 144559 144589 359ba5b8_55_LEFT_1 1 + TCCAGCAAATCTAGTAAATCAACTGATAGC 1.11
KJ642613.1_masked 147433 147457 359ba5b8_55_RIGHT_1 1 - CCACATGGTCCGTCAAATCTTCTC 1.11
KJ642613.1_masked 147259 147284 359ba5b8_56_LEFT_1 2 + AGTAGTATGCGGAACCAATAACGGA 3.04
KJ642613.1_masked 150129 150160 359ba5b8_56_RIGHT_1 2 - AGAAAACCATCAATACTCAACAACTATACGT 3.04
KJ642613.1_masked 149999 150028 359ba5b8_57_LEFT_1 1 + ACTTATTCTGATTCTTCTAGCCATTTCCG 1.57
KJ642613.1_masked 152853 152878 359ba5b8_57_RIGHT_1 1 - ACAAGTTCCTGGAGTTAACGAGAGA 1.57
KJ642613.1_masked 152623 152649 359ba5b8_58_LEFT_1 2 + TGTTTATGAACTCGAATACCGCCTCA 1.0
KJ642613.1_masked 155492 155513 359ba5b8_58_RIGHT_1 2 - TTTCCCGGTTCGTATACGCCA 1.0
KJ642613.1_masked 155328 155359 359ba5b8_59_LEFT_1 1 + CCATTGTATGAACGAAGATCTTTTCTCAAAG 2.7
KJ642613.1_masked 158200 158233 359ba5b8_59_RIGHT_1 1 - TTCCAAATACTTTAGAAAATCATTCGTGTACTG 2.7
KJ642613.1_masked 158057 158090 359ba5b8_60_LEFT_1 2 + CTGATGATGTTCAAACTAATACATCTGAAACAT 1.31
KJ642613.1_masked 160813 160842 359ba5b8_60_RIGHT_1 2 - AGAGTTTACCATGGTAATATATTGCAGCA 1.31
KJ642613.1_masked 160643 160679 359ba5b8_61_LEFT_1 1 + TGATCTAGAAACACTTGGATATTGTATGATTAGATG 2.2
KJ642613.1_masked 163518 163547 359ba5b8_61_RIGHT_1 1 - AATCTATTACGTGCATTAACATTTGCTCC 2.2
KJ642613.1_masked 163351 163381 359ba5b8_62_LEFT_1 2 + ACACACCGTTTATCCTATTATGTAAACACG 1.2
KJ642613.1_masked 166006 166032 359ba5b8_62_RIGHT_1 2 - ACCTCCAGTGATCGTACCAATAGTAG 1.2
KJ642613.1_masked 165765 165799 359ba5b8_63_LEFT_1 1 + GGTATAATGATGAATGAATTCGATACTGTATGTG 1.69
KJ642613.1_masked 165766 165799 359ba5b8_63_LEFT_2 1 + GTATAATGATGAATGAATGCGATACTGTATGTG 1.69
KJ642613.1_masked 168619 168647 359ba5b8_63_RIGHT_1 1 - GACATTCTTTTAGCAATGATTCCACACC 1.69
KJ642613.1_masked 168254 168284 359ba5b8_64_LEFT_1 2 + CACTCCATGCTAAAACAGAGTTGTAATAGA 1.56
KJ642613.1_masked 171232 171268 359ba5b8_64_RIGHT_1 2 - CATATTGATATAATCACCAGTTGAATAGAACACATC 1.56
KJ642613.1_masked 170891 170921 359ba5b8_65_LEFT_1 1 + AGGAATTTACCAGTGATTATCCCTTTTACG 1.95
KJ642613.1_masked 173763 173799 359ba5b8_65_RIGHT_1 1 - GTTAGTATATTTAAAACATAAATCGGACGATGACTC 1.95
KJ642613.1_masked 173408 173440 359ba5b8_66_LEFT_1 2 + CCACATCCTTTATTAAATCATGAATGGGAATT 1.5
KJ642613.1_masked 176220 176245 359ba5b8_66_RIGHT_1 2 - ACCTCGTGCGTTTATATCATTTCCG 1.5
KJ642613.1_masked 176012 176041 359ba5b8_67_LEFT_1 1 + TCTATGAACGCAGGTATATAGTACACTCC 1.01
KJ642613.1_masked 178947 178976 359ba5b8_67_RIGHT_1 1 - CAATACGGAATATCTACGTCCATGTCATT 1.01
KJ642613.1_masked 178793 178823 359ba5b8_68_LEFT_1 2 + AACATACGGATGAAAATGTTTTGATTCTCC 1.85
KJ642613.1_masked 178793 178823 359ba5b8_68_LEFT_2 2 + ACATACGGATGAAAATGTTTTGATTTCTCC 1.85
KJ642613.1_masked 181634 181663 359ba5b8_68_RIGHT_1 2 - TGTTTTCAAACATTCAGTGATATTGGTGG 1.85
KJ642613.1_masked 181254 181281 359ba5b8_69_LEFT_1 1 + AGAACTACAAGTGACTCCAACATATGC 1.33
KJ642613.1_masked 184129 184153 359ba5b8_69_RIGHT_1 1 - ATCATAGGGACAACCACCAGCTAA 1.33
KJ642613.1_masked 183713 183742 359ba5b8_70_LEFT_1 2 + ACGATACCAGTTTTAAACAGAATACGGAT 1.18
KJ642613.1_masked 186580 186619 359ba5b8_70_RIGHT_1 2 - CGATTATATAATGGATGATATGGTAATATGTAACTACCG 1.18
KJ642613.1_masked 184764 184789 359ba5b8_71_LEFT_1 1 + GGCTAGAGGAATGCCGTTTAGATCA 1.0
KJ642613.1_masked 187608 187633 359ba5b8_71_RIGHT_1 1 - ACCATCAGAAGCTTTAAGGAGACGA 1.0
2 changes: 2 additions & 0 deletions primerschemes/artic-inrb-mpox/2500/v1.0.1/primer.html

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