fix box indexing #3031
Workflow file for this run
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| name: CMake | |
| on: [push] | |
| env: | |
| # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.) | |
| BUILD_TYPE: Release | |
| jobs: | |
| build: | |
| # The CMake configure and build commands are platform agnostic and should work equally | |
| # well on Windows or Mac. You can convert this to a matrix build if you need | |
| # cross-platform coverage. | |
| # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix | |
| runs-on: ubuntu-20.04 | |
| #runs-on: self-hosted | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| fetch-depth: 0 # Shallow clones should be disabled for a better relevancy of sonarcloud analysis | |
| - name: Create Build Environment | |
| # Some projects don't allow in-source building, so create a separate build directory | |
| # We'll use this as our working directory for all subsequent commands | |
| run: cmake -E make_directory ${{runner.workspace}}/build | |
| - name: Install dependencies | |
| run: sudo apt-get update && sudo apt-get install gcc-11 g++-11 python3-dev python3-numpy python3-matplotlib python3-pip lcov libopenmpi-dev libhdf5-mpi-dev ccache libboost-dev libyaml-cpp-dev | |
| - name: Install fastcov | |
| run: pip3 install fastcov --user | |
| - name: Install Sonarscan CLI | |
| run: ( curl https://binaries.sonarsource.com/Distribution/sonar-scanner-cli/sonar-scanner-cli-4.5.0.2216-linux.zip > sonar-scanner.zip ) && unzip sonar-scanner.zip -d ${{runner.workspace}} | |
| - name: Install Sonarscan Build Wrapper | |
| run: ( curl https://sonarcloud.io/static/cpp/build-wrapper-linux-x86.zip > build-wrapper.zip ) && unzip build-wrapper.zip -d ${{runner.workspace}} | |
| - name: Configure CMake | |
| # Use a bash shell so we can use the same syntax for environment variable | |
| # access regardless of the host operating system | |
| shell: bash | |
| working-directory: ${{runner.workspace}}/build | |
| # Note the current convention is to use the -S and -B options here to specify source | |
| # and build directories, but this is only available with CMake 3.13 and higher. | |
| # The CMake binaries on the Github Actions machines are (as of this writing) 3.12 | |
| run: cmake $GITHUB_WORKSPACE -DCMAKE_BUILD_TYPE=$BUILD_TYPE -DCMAKE_C_COMPILER=gcc-11 -DCMAKE_CXX_COMPILER=g++-11 -DENABLE_ASAN=ON | |
| - name: Build | |
| working-directory: ${{runner.workspace}}/build | |
| shell: bash | |
| # Execute the build. You can specify a specific target with "--target <NAME>" | |
| run: ${{runner.workspace}}/build-wrapper-linux-x86/build-wrapper-linux-x86-64 --out-dir bw-output cmake --build . --config $BUILD_TYPE | |
| - name: Create test output directory | |
| run: cmake -E make_directory $GITHUB_WORKSPACE/tests | |
| - name: Test | |
| working-directory: ${{runner.workspace}}/build | |
| shell: bash | |
| # Execute tests defined by the CMake configuration. | |
| # See https://cmake.org/cmake/help/latest/manual/ctest.1.html for more detail | |
| run: ASAN_OPTIONS=abort_on_error=1:fast_unwind_on_malloc=1:detect_leaks=0 UBSAN_OPTIONS=print_stacktrace=0 LSAN_OPTIONS=suppressions=$GITHUB_WORKSPACE/tests/leak_suppress.txt ctest --output-on-failure -C $BUILD_TYPE | |
| - name: Upload test output | |
| if: always() | |
| uses: actions/upload-artifact@v2 | |
| with: | |
| name: test-results | |
| path: ${{github.workspace}}/tests | |
| #- name: Run code coverage | |
| # working-directory: ${{runner.workspace}}/build | |
| # run: cmake --build . --config $BUILD_TYPE --target coverage | |
| - name: SonarCloud Scan | |
| working-directory: ${{github.workspace}} | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} # Needed to get PR information, if any | |
| SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }} | |
| run: ${{runner.workspace}}/sonar-scanner-4.5.0.2216-linux/bin/sonar-scanner -Dsonar.cfamily.build-wrapper-output=${{runner.workspace}}/build/bw-output |