Use microphysics EOS in Quokka's EOS.hpp for all quokka tests + use amu instead of hydrogen mass throughout Quokka #3035
Workflow file for this run
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| name: CMake | |
| on: | |
| push: | |
| branches: [ development ] | |
| pull_request: | |
| # The branches below must be a subset of the branches above | |
| branches: [ development ] | |
| merge_group: | |
| branches: [ development ] | |
| concurrency: | |
| group: ${{ github.ref }}-${{ github.head_ref }}-cmake-linux | |
| cancel-in-progress: true | |
| env: | |
| # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.) | |
| BUILD_TYPE: Release | |
| jobs: | |
| build: | |
| # The CMake configure and build commands are platform agnostic and should work equally | |
| # well on Windows or Mac. You can convert this to a matrix build if you need | |
| # cross-platform coverage. | |
| # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| fetch-depth: 0 # Shallow clones should be disabled for a better relevancy of sonarcloud analysis | |
| - name: Create Build Environment | |
| # Some projects don't allow in-source building, so create a separate build directory | |
| # We'll use this as our working directory for all subsequent commands | |
| run: cmake -E make_directory ${{runner.workspace}}/build | |
| - name: Install dependencies | |
| run: sudo apt-get update && sudo apt-get install gcc-11 g++-11 python3-dev python3-numpy python3-matplotlib python3-pip lcov libopenmpi-dev libhdf5-mpi-dev ccache libboost-dev | |
| - name: Configure CMake | |
| # Use a bash shell so we can use the same syntax for environment variable | |
| # access regardless of the host operating system | |
| shell: bash | |
| working-directory: ${{runner.workspace}}/build | |
| # Note the current convention is to use the -S and -B options here to specify source | |
| # and build directories, but this is only available with CMake 3.13 and higher. | |
| # The CMake binaries on the Github Actions machines are (as of this writing) 3.12 | |
| run: cmake $GITHUB_WORKSPACE -DCMAKE_BUILD_TYPE=$BUILD_TYPE -DCMAKE_C_COMPILER=gcc-11 -DCMAKE_CXX_COMPILER=g++-11 -DENABLE_ASAN=ON | |
| - name: Build | |
| working-directory: ${{runner.workspace}}/build | |
| shell: bash | |
| # Execute the build. You can specify a specific target with "--target <NAME>" | |
| # Restrict to 1 build process at a time to avoid OOM kills. | |
| run: cmake --build . --config $BUILD_TYPE --parallel 1 | |
| - name: Create test output directory | |
| run: cmake -E make_directory $GITHUB_WORKSPACE/tests | |
| - name: Test | |
| working-directory: ${{runner.workspace}}/build | |
| shell: bash | |
| # Execute tests defined by the CMake configuration. | |
| # See https://cmake.org/cmake/help/latest/manual/ctest.1.html for more detail | |
| run: ASAN_OPTIONS=abort_on_error=1:fast_unwind_on_malloc=1:detect_leaks=0 UBSAN_OPTIONS=print_stacktrace=0 LSAN_OPTIONS=suppressions=$GITHUB_WORKSPACE/tests/leak_suppress.txt ctest --output-on-failure -C $BUILD_TYPE | |
| - name: Upload test output | |
| if: always() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: test-results | |
| path: ${{github.workspace}}/tests |