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Project init #16

Merged
merged 76 commits into from
Oct 1, 2020
Merged

Project init #16

merged 76 commits into from
Oct 1, 2020

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landmanbester
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Fix readme and change defaults scripts added during install

landmanbester and others added 28 commits June 1, 2020 15:36
* checkpoint

* More tests

* fix

* Add row slicing

* Generic axis slicing. Segfaults in some cases

* This seems to resolve the segfaults

* Modularise

* Test flags are the same

* Seems to fix segfaults

* Contiguity handling

* Remove debug in jit decorators

* tidy up

* Mode enums

* Outline, segfaults when compiling

* utils.py -> numba_llvm.py

* Use step in downsampling convolution

* Fixes and more tests, but not working yet

* numba_llvm.py => intrinsics.py

* Extend test_slice_axis

* dwt working

* simplify

* idwt_axis working

* Working idwtn

* Argument promotion fixups

* More test case

* Complain about periodisation downsampling

* cache decorators

* waverecn in place, coeff trimming not yet done

* Add extent to slice_axis

* Clip coefficients in idwt_axis

This also gets the waverecn test case working.

* cache=True, remove level arg from waverecn

* Add axes and level tests to waverecn/wavedecn tests

* Add fastmath decorators

* Use numba typed Lists

* test zeropad and levels

* Disable wavelet level warnings for now
* Refactored PSI functions. Dask results agree but no speedup

* Also clean up prox_21

* Refactored code producing identical results

* Added some checks for exponential model. Seems to cope much better with point sources

* Refactor prox

* New prox seems to be working. Testing on ESO137

* Change value of alpha -> 1e-8

* Add reweight_alpha_min option

* Add testing solve_x0 with tidy

* Still no cigar

* Looks like exponential model works best for point source fields

* Ok

* Add logic for spatial 'taper' in prior

* Try convolving expsq kernel

* Try convolving expsq kernel

* K.iconvolve working

* Try new K in exponential model

* Trying K.iconvolve in exponential model

* Use pywt.ravel_coeffs instead of doing it manually

* New PSI working

* Remove exponential scripts

* Move scripts into subdirectory

* Change project structure

* Remove old tests. Getting pfb is not a package error

* Rename pfb.py to pfbclean.py

* Do not put pfb executable in pfb package

* Parallel pywt correct but not really much faster

* Rewriting gridder

* Dirty accumulation

* All gridder functions working
@landmanbester landmanbester merged commit d0ed974 into master Oct 1, 2020
@landmanbester landmanbester deleted the project_init branch October 1, 2020 09:33
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2 participants