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Regenie v3.0.1

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@joellembatchou joellembatchou released this 18 Mar 12:16
· 434 commits to master since this release
  • Reduce convergence issues with ridge logistic regression in Step 1
  • Now able to compile the Regenie binary with Cmake:
mkdir -p build # from main regenie directory 
cd build
cmake ..  # e.g. to add boost iostreams and intel mkl, use `HAS_BOOST_IOSTREAM=1 MKLROOT=/path_to_mkl/ cmake ..`
make
  • Note that this release is also available in conda
  • Fixed bug in SKAT/ACAT gene-based tests when the variant set is empty (only affected QT run)