Skip to content

Commit

Permalink
Small edits
Browse files Browse the repository at this point in the history
  • Loading branch information
rrwick committed Oct 2, 2017
1 parent a7d8427 commit 4573b68
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -275,7 +275,7 @@ I found it curious that many basecallers had a distinctly bimodal distribution.

This analysis is my personal favourite: how accurate are the _consensus_ sequences? I don't particularly care if individual reads have low identity if they can produce an accurate assembly.

Albacore v2.0.2 leads the pack with an accuracy of over 99.5% (less than one error per 200 bases). Most surprisingly, Albacore v0.9.1, which had very poor read identity, also did well. Scrappie raw v1.0.0, basecRAWller and DeepNano all performed poorly (BasecRAWller isn't missing from this plot, it's just off the bottom with a median value in the 80s).
Albacore v2.0.2 leads the pack with an accuracy of over 99.5% (less than one error per 200 bases). Most surprisingly, Albacore v0.9.1, which had very poor read identity, also did well. Scrappie raw v1.0.0, basecRAWller and DeepNano all performed poorly (basecRAWller isn't missing from this plot, it's just off the bottom with a median value in the 80s).

It's also interesting to look at the assembly relative length, like we did for reads:

Expand Down

0 comments on commit 4573b68

Please sign in to comment.