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R-CMD-check

R-CMD-check #658

Manually triggered June 25, 2024 09:13
Status Failure
Total duration 12m 37s
Artifacts 16

R-CMD-check.yaml

on: workflow_dispatch
Matrix: R-CMD-check
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7 errors and 30 warnings
ubuntu-latest (release) [Pandoc devel]
LaTeX failed to compile acs_article.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See acs_article.log for more info.
ubuntu-latest (release) [Pandoc devel]
R CMD check found ERRORs
ubuntu-latest (release) [Pandoc devel]
Process completed with exit code 1.
macOS-latest (release) [Pandoc 3.1.9]
No such keg: /opt/homebrew/Cellar/r
windows-latest (release) [Pandoc 3.1.9]
R CMD check found ERRORs
windows-latest (release) [Pandoc 3.1.9]
LaTeX failed to compile bioinformatics_article.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See bioinformatics_article.log for more info.
windows-latest (release) [Pandoc 3.1.9]
Process completed with exit code 1.
ubuntu-latest (release) [Pandoc devel]
LaTeX Warning: Command `\thepart' already defined -- not changed on input line 978.
ubuntu-latest (release) [Pandoc devel]
LaTeX Warning: Command `\thesection' already defined -- not changed on input line 979.
ubuntu-latest (release) [Pandoc devel]
LaTeX Warning: Command `\thesubsection' already defined -- not changed on input line 980.
ubuntu-latest (release) [Pandoc devel]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (release) [Pandoc 3.1.9]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (release) [Pandoc 3.1.9]
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-latest (release) [Pandoc 3.1.9]
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
windows-latest (release) [Pandoc 3.1.9]
LaTeX Warning: Command `\thepart' already defined -- not changed on input line 978.
windows-latest (release) [Pandoc 3.1.9]
LaTeX Warning: Command `\thesection' already defined -- not changed on input line 979.
windows-latest (release) [Pandoc 3.1.9]
LaTeX Warning: Command `\thesubsection' already defined -- not changed on input line 980.
windows-latest (release) [Pandoc 3.1.9]
LaTeX Warning: `h' float specifier changed to `ht'.
windows-latest (release) [Pandoc 3.1.9]
LaTeX Warning: `h' float specifier changed to `ht'.
windows-latest (release) [Pandoc 3.1.9]
Package soulutf8 Warning: This package is obsolete,
windows-latest (release) [Pandoc 3.1.9]
(soulutf8) use the soul package directly.
windows-latest (release) [Pandoc 3.1.9]
(soulutf8) on input line 29.
windows-latest (release) [Pandoc 3.1.9]
Package trackchanges Warning: TrackChanges is not compatable with the
windows-latest (release) [Pandoc 3.1.9]
(trackchanges) 'ulem' package.
ubuntu-latest (release) [Pandoc 2.5]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (oldrel-1) [Pandoc 2.11.4]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release) [Pandoc 2.7.3]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release) [Pandoc 3.1.7]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release) [Pandoc 2.14.2]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (oldrel-2) [Pandoc 2.11.4]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release) [Pandoc 2.18]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (oldrel-3) [Pandoc 2.11.4]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release) [Pandoc 2.16.2]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release) [Pandoc 2.11.4]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release) [Pandoc 2.17.1.1]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release) [Pandoc 2.19.2]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (devel) [Pandoc 2.11.4]
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Artifacts

Produced during runtime
Name Size
Linux-X64-rdevel-12-testthat-snapshots
828 Bytes
Linux-X64-roldrel-1-13-testthat-snapshots
828 Bytes
Linux-X64-roldrel-2-14-testthat-snapshots
828 Bytes
Linux-X64-roldrel-3-15-testthat-snapshots
828 Bytes
Linux-X64-rrelease-10-testthat-snapshots
828 Bytes
Linux-X64-rrelease-11-testthat-snapshots
828 Bytes
Linux-X64-rrelease-2-results
95.9 MB
Linux-X64-rrelease-3-testthat-snapshots
828 Bytes
Linux-X64-rrelease-4-testthat-snapshots
828 Bytes
Linux-X64-rrelease-5-testthat-snapshots
828 Bytes
Linux-X64-rrelease-6-testthat-snapshots
828 Bytes
Linux-X64-rrelease-7-testthat-snapshots
828 Bytes
Linux-X64-rrelease-8-testthat-snapshots
828 Bytes
Linux-X64-rrelease-9-testthat-snapshots
828 Bytes
Windows-X64-rrelease-0-results
15.3 MB
macOS-ARM64-rrelease-1-testthat-snapshots
828 Bytes