Addresses warning from release attempt #20
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| on: | |
| push: | |
| branches: main | |
| pull_request: | |
| branches: main | |
| name: Coverage | |
| jobs: | |
| Coverage: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: 'release' | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: | | |
| any::devtools | |
| any::arrow | |
| any::sparklyr | |
| any::covr | |
| needs: check | |
| - name: Set up Python 3.10 | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| - name: Install XGBooxt | |
| run: | | |
| pip install xgboost | |
| - name: Cache Spark | |
| id: cache-spark-2 | |
| uses: actions/cache@v2 | |
| with: | |
| path: /home/runner/spark/spark-3.5.1-bin-hadoop3 | |
| key: sparklyr-spark-3.5.1-bin-hadoop3-2 | |
| - name: Install Spark (via sparklyr) | |
| if: steps.cache-spark-2.outputs.cache-hit != 'true' | |
| run: | | |
| sparklyr::spark_install(version = "3.5") | |
| shell: Rscript {0} | |
| - name: Cache Scala | |
| id: cache-scala | |
| uses: actions/cache@v3 | |
| with: | |
| path: /home/runner/scala/ | |
| key: scala-2 | |
| - name: Install Scala (via sparklyr) | |
| if: steps.cache-scala.outputs.cache-hit != 'true' | |
| run: | | |
| sparklyr::download_scalac() | |
| shell: Rscript {0} | |
| - name: R Session Info | |
| run: sessionInfo() | |
| shell: Rscript {0} | |
| - name: R Environment Variables | |
| run: Sys.getenv() | |
| shell: Rscript {0} | |
| - name: R Installed Packages | |
| run: | | |
| m_pkgs <- installed.packages() | |
| t_pkgs <- as.data.frame(m_pkgs, row.names = FALSE) | |
| print(t_pkgs[, c("Package", "Version")]) | |
| shell: Rscript {0} | |
| - name: Test coverage | |
| run: | | |
| Sys.setenv("SPARK_VERSION" = "3.5") | |
| Sys.setenv("CODE_COVERAGE" = "true") | |
| devtools::load_all() | |
| covr::codecov( | |
| quiet = FALSE, | |
| clean = FALSE, | |
| token = "${{ secrets.CODECOV_TOKEN }}", | |
| install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package") | |
| ) | |
| shell: Rscript {0} | |
| - name: Show testthat output | |
| if: always() | |
| run: | | |
| ## -------------------------------------------------------------------- | |
| find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true | |
| shell: bash | |
| - name: Upload test results | |
| if: failure() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: coverage-test-failures | |
| path: ${{ runner.temp }}/package | |