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Add Weaviate Destination airbytehq#20012
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samos123 committed Dec 6, 2022
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*
!Dockerfile
!main.py
!destination_weaviate
!setup.py
38 changes: 38 additions & 0 deletions airbyte-integrations/connectors/destination-weaviate/Dockerfile
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FROM python:3.9.11-alpine3.15 as base

# build and load all requirements
FROM base as builder
WORKDIR /airbyte/integration_code

# upgrade pip to the latest version
RUN apk --no-cache upgrade \
&& pip install --upgrade pip \
&& apk --no-cache add tzdata build-base


COPY setup.py ./
# install necessary packages to a temporary folder
RUN pip install --prefix=/install .

# build a clean environment
FROM base
WORKDIR /airbyte/integration_code

# copy all loaded and built libraries to a pure basic image
COPY --from=builder /install /usr/local
# add default timezone settings
COPY --from=builder /usr/share/zoneinfo/Etc/UTC /etc/localtime
RUN echo "Etc/UTC" > /etc/timezone

# bash is installed for more convenient debugging.
RUN apk --no-cache add bash

# copy payload code only
COPY main.py ./
COPY destination_weaviate ./destination_weaviate

ENV AIRBYTE_ENTRYPOINT "python /airbyte/integration_code/main.py"
ENTRYPOINT ["python", "/airbyte/integration_code/main.py"]

LABEL io.airbyte.version=0.1.0
LABEL io.airbyte.name=airbyte/destination-weaviate
123 changes: 123 additions & 0 deletions airbyte-integrations/connectors/destination-weaviate/README.md
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# Weaviate Destination

This is the repository for the Weaviate destination connector, written in Python.
For information about how to use this connector within Airbyte, see [the documentation](https://docs.airbyte.io/integrations/destinations/weaviate).

## Local development

### Prerequisites
**To iterate on this connector, make sure to complete this prerequisites section.**

#### Minimum Python version required `= 3.7.0`

#### Build & Activate Virtual Environment and install dependencies
From this connector directory, create a virtual environment:
```
python -m venv .venv
```

This will generate a virtualenv for this module in `.venv/`. Make sure this venv is active in your
development environment of choice. To activate it from the terminal, run:
```
source .venv/bin/activate
pip install -r requirements.txt
```
If you are in an IDE, follow your IDE's instructions to activate the virtualenv.

Note that while we are installing dependencies from `requirements.txt`, you should only edit `setup.py` for your dependencies. `requirements.txt` is
used for editable installs (`pip install -e`) to pull in Python dependencies from the monorepo and will call `setup.py`.
If this is mumbo jumbo to you, don't worry about it, just put your deps in `setup.py` but install using `pip install -r requirements.txt` and everything
should work as you expect.

#### Building via Gradle
From the Airbyte repository root, run:
```
./gradlew :airbyte-integrations:connectors:destination-weaviate:build
```

#### Create credentials
**If you are a community contributor**, follow the instructions in the [documentation](https://docs.airbyte.io/integrations/destinations/weaviate)
to generate the necessary credentials. Then create a file `secrets/config.json` conforming to the `destination_weaviate/spec.json` file.
Note that the `secrets` directory is gitignored by default, so there is no danger of accidentally checking in sensitive information.
See `integration_tests/sample_config.json` for a sample config file.

**If you are an Airbyte core member**, copy the credentials in Lastpass under the secret name `destination weaviate test creds`
and place them into `secrets/config.json`.

### Locally running the connector
```
python main.py spec
python main.py check --config secrets/config.json
python main.py discover --config secrets/config.json
python main.py read --config secrets/config.json --catalog integration_tests/configured_catalog.json
```

### Locally running the connector docker image

#### Build
First, make sure you build the latest Docker image:
```
docker build . -t airbyte/destination-weaviate:dev
```

You can also build the connector image via Gradle:
```
./gradlew :airbyte-integrations:connectors:destination-weaviate:airbyteDocker
```
When building via Gradle, the docker image name and tag, respectively, are the values of the `io.airbyte.name` and `io.airbyte.version` `LABEL`s in
the Dockerfile.

#### Run
Then run any of the connector commands as follows:
```
docker run --rm airbyte/destination-weaviate:dev spec
docker run --rm -v $(pwd)/secrets:/secrets airbyte/destination-weaviate:dev check --config /secrets/config.json
# messages.jsonl is a file containing line-separated JSON representing AirbyteMessages
cat messages.jsonl | docker run --rm -v $(pwd)/secrets:/secrets -v $(pwd)/integration_tests:/integration_tests airbyte/destination-weaviate:dev write --config /secrets/config.json --catalog /integration_tests/configured_catalog.json
```
## Testing
Make sure to familiarize yourself with [pytest test discovery](https://docs.pytest.org/en/latest/goodpractices.html#test-discovery) to know how your test files and methods should be named.
First install test dependencies into your virtual environment:
```
pip install .[tests]
```
### Unit Tests
To run unit tests locally, from the connector directory run:
```
python -m pytest unit_tests
```

### Integration Tests
There are two types of integration tests: Acceptance Tests (Airbyte's test suite for all destination connectors) and custom integration tests (which are specific to this connector).
#### Custom Integration tests
Place custom tests inside `integration_tests/` folder, then, from the connector root, run
```
python -m pytest integration_tests
```
#### Acceptance Tests
Coming soon:

### Using gradle to run tests
All commands should be run from airbyte project root.
To run unit tests:
```
./gradlew :airbyte-integrations:connectors:destination-weaviate:unitTest
```
To run acceptance and custom integration tests:
```
./gradlew :airbyte-integrations:connectors:destination-weaviate:integrationTest
```

## Dependency Management
All of your dependencies should go in `setup.py`, NOT `requirements.txt`. The requirements file is only used to connect internal Airbyte dependencies in the monorepo for local development.
We split dependencies between two groups, dependencies that are:
* required for your connector to work need to go to `MAIN_REQUIREMENTS` list.
* required for the testing need to go to `TEST_REQUIREMENTS` list

### Publishing a new version of the connector
You've checked out the repo, implemented a million dollar feature, and you're ready to share your changes with the world. Now what?
1. Make sure your changes are passing unit and integration tests.
1. Bump the connector version in `Dockerfile` -- just increment the value of the `LABEL io.airbyte.version` appropriately (we use [SemVer](https://semver.org/)).
1. Create a Pull Request.
1. Pat yourself on the back for being an awesome contributor.
1. Someone from Airbyte will take a look at your PR and iterate with you to merge it into master.
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plugins {
id 'airbyte-python'
id 'airbyte-docker'
}

airbytePython {
moduleDirectory 'destination_weaviate'
}
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#
# Copyright (c) 2022 Airbyte, Inc., all rights reserved.
#


from .destination import DestinationWeaviate

__all__ = ["DestinationWeaviate"]
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import weaviate

from typing import Any, Mapping
import uuid


class Client:
def __init__(self, config: Mapping[str, Any]):
self.client = self.get_weaviate_client(config)
self.config = config
self.batch_size = 100

def queue_write_operation(self, stream_name: str, record: Mapping):
# TODO need to handle case where original DB ID is not a UUID
id = ""
if record.get('id'):
id = record.get("id")
del record["id"]
else:
id = uuid.uuid4()

self.client.batch.add_data_object(record, stream_name, id)
if self.client.batch.num_objects() >= self.batch_size:
self.client.batch.create_objects()

def flush(self):
self.client.batch.create_objects()

@staticmethod
def get_weaviate_client(config: Mapping[str, Any]) -> weaviate.Client:
url, username, password = config.get("url"), config.get("username"), config.get("password")

if username and not password:
raise Exception("Password is required when username is set")
if password and not username:
raise Exception("Username is required when password is set")

if username and password:
credentials = weaviate.auth.AuthClientPassword(username, password)
return weaviate.Client(url=url, auth_client_secret=credentials)
return weaviate.Client(url=url, timeout_config=(2, 2))
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#
# Copyright (c) 2022 Airbyte, Inc., all rights reserved.
#


from typing import Any, Iterable, Mapping

from airbyte_cdk import AirbyteLogger
from airbyte_cdk.destinations import Destination
from airbyte_cdk.models import AirbyteConnectionStatus, AirbyteMessage, ConfiguredAirbyteCatalog, DestinationSyncMode, Status, Type


from .client import Client


class DestinationWeaviate(Destination):
def write(
self, config: Mapping[str, Any], configured_catalog: ConfiguredAirbyteCatalog, input_messages: Iterable[AirbyteMessage]
) -> Iterable[AirbyteMessage]:

"""
TODO
Reads the input stream of messages, config, and catalog to write data to the destination.
This method returns an iterable (typically a generator of AirbyteMessages via yield) containing state messages received
in the input message stream. Outputting a state message means that every AirbyteRecordMessage which came before it has been
successfully persisted to the destination. This is used to ensure fault tolerance in the case that a sync fails before fully completing,
then the source is given the last state message output from this method as the starting point of the next sync.
:param config: dict of JSON configuration matching the configuration declared in spec.json
:param configured_catalog: The Configured Catalog describing the schema of the data being received and how it should be persisted in the
destination
:param input_messages: The stream of input messages received from the source
:return: Iterable of AirbyteStateMessages wrapped in AirbyteMessage structs
"""
client = Client(config)
# TODO add support for overwrite mode
#for configured_stream in configured_catalog.streams:
# if configured_stream.destination_sync_mode == DestinationSyncMode.overwrite:
# client.delete_stream_entries(configured_stream.stream.name)

for message in input_messages:
if message.type == Type.STATE:
# Emitting a state message indicates that all records which came before it have been written to the destination. So we flush
# the queue to ensure writes happen, then output the state message to indicate it's safe to checkpoint state
client.flush()
yield message
elif message.type == Type.RECORD:
record = message.record
client.queue_write_operation(record.stream, record.data)
else:
# ignore other message types for now
continue

# Make sure to flush any records still in the queue
client.flush()

def check(self, logger: AirbyteLogger, config: Mapping[str, Any]) -> AirbyteConnectionStatus:
"""
Tests if the input configuration can be used to successfully connect to the destination with the needed permissions
e.g: if a provided API token or password can be used to connect and write to the destination.
:param logger: Logging object to display debug/info/error to the logs
(logs will not be accessible via airbyte UI if they are not passed to this logger)
:param config: Json object containing the configuration of this destination, content of this json is as specified in
the properties of the spec.json file
:return: AirbyteConnectionStatus indicating a Success or Failure
"""
try:
client = Client.get_weaviate_client(config)
ready = client.is_ready()
if not ready:
return AirbyteConnectionStatus(status=Status.FAILED,
message=f"Weaviate server {config.get('url')} not ready")
return AirbyteConnectionStatus(status=Status.SUCCEEDED)
except Exception as e:
return AirbyteConnectionStatus(status=Status.FAILED, message=f"An exception occurred: {repr(e)}")
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{
"documentationUrl" : "https://docs.airbyte.com/integrations/destinations/weaviate",
"supported_destination_sync_modes" : [
"append"
],
"supportsIncremental" : true,
"supportsDBT" : false,
"supportsNormalization" : false,
"connectionSpecification" : {
"$schema" : "http://json-schema.org/draft-07/schema#",
"title" : "Destination Weaviate",
"type" : "object",
"required" : [
"url"
],
"additionalProperties" : false,
"properties" : {
"url" : {
"type" : "string",
"description" : "The URL to the weaviate instance",
"examples" : [
"http://localhost:8080",
"https://your-instance.semi.network"
]
},
"username" : {
"type" : "string",
"description" : "Username used with OIDC authentication",
"examples" : [
"xyz@weaviate.io"
]
},
"password" : {
"type" : "string",
"description" : "Password used with OIDC authentication"
}
}
}
}
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{ "url": "http://localhost:8080"}
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