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Merge branch 'master' into develop
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andrewwbutler committed Feb 18, 2021
2 parents f3d8725 + dce8094 commit ebb33fd
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion vignettes/weighted_nearest_neighbor_analysis.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -264,7 +264,7 @@ Idents(pbmc) <- "sub.cluster"
# add annotations
pbmc <- RenameIdents(pbmc, '19' = 'pDC','20' = 'HSPC','15' = 'cDC')
pbmc <- RenameIdents(pbmc, '0' = 'CD14 Mono', '9' ='CD14 Mono', '5' = 'CD16 Mono')
pbmc <- RenameIdents(pbmc, '17' = 'Naive B', '11' = 'Intermediate B', '10' = 'Memory B', '21' = 'Plasma')
pbmc <- RenameIdents(pbmc, '10' = 'Naive B', '11' = 'Intermediate B', '17' = 'Memory B', '21' = 'Plasma')
pbmc <- RenameIdents(pbmc, '7' = 'NK')
pbmc <- RenameIdents(pbmc, '4' = 'CD4 TCM', '13'= "CD4 TEM", '3' = "CD4 TCM", '16' ="Treg", '1' ="CD4 Naive", '14' = "CD4 Naive")
pbmc <- RenameIdents(pbmc, '2' = 'CD8 Naive', '8'= "CD8 Naive", '12' = 'CD8 TEM_1', '6_0' = 'CD8 TEM_2', '6_1' ='CD8 TEM_2', '6_4' ='CD8 TEM_2')
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