Seurat v4.0.1 #4247
Merged
Seurat v4.0.1 #4247
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Allow users to plot cluster tree in the horizontal orientation. The default behavior (ie., vertical plot) is unchanged. However, users now have an option to draw horizontally (ie., direction = "right").
Naming consistency with Read10X
Add direction option to PlotClusterTree
Track step1 feature parameters in feature.attributes of SCTAssay
Fix anchor filtration
Add spatial section in website docs, add concept tags
Style fixes
HVFInfo for SCTAssay
Equality thresholds in FindMarkers
Dont specify mandatory argument as NULL in Read10X
fix imports with spatstat update
check nn.name input type
Add ReadMtx() to read local and remote mtx files
Prep for CRAN release of 4.0.1
satijalab
approved these changes
Mar 18, 2021
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Patch release to support the new spatstat; please see our NEWS file for more details
Resolves #4226