Exploring the phenology of xylogenesis, using data from Huang et al. 2020 doi:10.1073/pnas.2007058117. Methodological details can be found in the methods.pdf document.
- To run the cross validation you will first need to add the ERA_export_pnas_clim_08_20_2020.csv to your own personal /data directory; it is too big for git and will be ignored in the .gitignore
- It can be downloaded from here
- paths in scripts relative to the top project directory unless otherwise noted
- data Supp mat tables from Huang et al.
- scripts
- cv_huang Analysis of data using cross-validation
- gddsims_huang simulations
- GEE_ERA_extraction.txt Google Earth Engine script to download ERA 5 reanalysis daily climate data for sites
- plots
- figures from simulations and cross validations + some checks on calculations
- output & calculations generate some intermediary files, can speed up rerunning code when tweaking figures