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(feat): raising errors where backed is not supported #3048

Merged
merged 40 commits into from
May 21, 2024
Merged

(feat): raising errors where backed is not supported #3048

merged 40 commits into from
May 21, 2024

Commits on May 8, 2024

  1. (feat): first step raising errors where backed is not supported

    @ilan-gold
    ilan-gold committed May 8, 2024
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  2. (fix): fix chunked with log1p

    @ilan-gold
    ilan-gold committed May 8, 2024
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  3. (fix): complications in log1p with chunked

    @ilan-gold
    ilan-gold committed May 8, 2024
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Commits on May 13, 2024

  1. Merge branch 'main' into ig/backed_not_implemented

    @flying-sheep
    flying-sheep committed May 13, 2024
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  2. remove duplicated import

    @flying-sheep
    flying-sheep committed May 13, 2024
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  3. (feat): pca check

    @ilan-gold
    ilan-gold committed May 13, 2024
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  4. Merge branch 'ig/backed_not_implemented' of github.com:scverse/scanpy… 

    … into ig/backed_not_implemented
    @ilan-gold
    ilan-gold committed May 13, 2024
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  5. (feat): ingest check added

    @ilan-gold
    ilan-gold committed May 13, 2024
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  6. (feat): add dendrogram test

    @ilan-gold
    ilan-gold committed May 13, 2024
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  7. (feat): add tsne check

    @ilan-gold
    ilan-gold committed May 13, 2024
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  8. (feat): rank_genes_groups

    @ilan-gold
    ilan-gold committed May 13, 2024
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  9. (feat): score_genes check

    @ilan-gold
    ilan-gold committed May 13, 2024
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  10. (chore): add plotting backed tests

    @ilan-gold
    ilan-gold committed May 13, 2024
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Commits on May 14, 2024

  1. Merge branch 'main' into ig/backed_not_implemented

    @ilan-gold
    ilan-gold committed May 14, 2024
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  2. (chore): check type instead of isbacked

    @ilan-gold
    ilan-gold committed May 14, 2024
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  3. Merge branch 'ig/backed_not_implemented' of github.com:scverse/scanpy… 

    … into ig/backed_not_implemented
    @ilan-gold
    ilan-gold committed May 14, 2024
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  4. (chore): release note

    @ilan-gold
    ilan-gold committed May 14, 2024
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  5. (fix): string formatting error

    @ilan-gold
    ilan-gold committed May 14, 2024
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  6. (fix): worker_id default

    @ilan-gold
    ilan-gold committed May 14, 2024
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  7. Merge branch 'main' into ig/backed_not_implemented

    @ilan-gold
    ilan-gold committed May 14, 2024
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  8. (fix): try SparseDataset

    @ilan-gold
    ilan-gold committed May 14, 2024
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  9. Merge branch 'ig/backed_not_implemented' of github.com:scverse/scanpy… 

    … into ig/backed_not_implemented
    @ilan-gold
    ilan-gold committed May 14, 2024
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  10. (fix): correct fixture creation

    @ilan-gold
    ilan-gold committed May 14, 2024
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  11. Apply suggestions from code review 

    Co-authored-by: Philipp A. <flying-sheep@web.de>
    @ilan-gold @flying-sheep
    ilan-gold and flying-sheep committed May 14, 2024
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  12. (chore): consolidate tests

    @ilan-gold
    ilan-gold committed May 14, 2024
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  13. (chore): remove erroneous plotting tests

    @ilan-gold
    ilan-gold committed May 14, 2024
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  14. (chore): remove other tempfile import

    @ilan-gold
    ilan-gold committed May 14, 2024
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Commits on May 15, 2024

  1. Merge branch 'main' into ig/backed_not_implemented

    @ilan-gold
    ilan-gold committed May 15, 2024
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  2. (fix): try moving scanpy install

    @ilan-gold
    ilan-gold committed May 15, 2024
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  3. (fix): np.Inf -> np.inf

    @ilan-gold
    ilan-gold committed May 15, 2024
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Commits on May 16, 2024

  1. (fix): fail if pynn is newest

    @ilan-gold
    ilan-gold committed May 16, 2024
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  2. (fix): name

    @ilan-gold
    ilan-gold committed May 16, 2024
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  3. (fix): score_genes name

    @ilan-gold
    ilan-gold committed May 16, 2024
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Commits on May 17, 2024

  1. Merge branch 'main' into ig/backed_not_implemented

    @flying-sheep
    flying-sheep committed May 17, 2024
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  2. revert 88d51ab

    @flying-sheep
    flying-sheep committed May 17, 2024
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  3. session-scoped backed_adata

    @flying-sheep
    flying-sheep committed May 17, 2024
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  4. Merge branch 'main' into ig/backed_not_implemented

    @ilan-gold
    ilan-gold committed May 17, 2024
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  5. (fix): move umap import back to top

    @ilan-gold
    ilan-gold committed May 17, 2024
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  6. (fix): try block shape

    @ilan-gold
    ilan-gold committed May 17, 2024
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  7. (fix): revert chunks fix

    @ilan-gold
    ilan-gold committed May 17, 2024
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