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@seqan

SeqAn

SeqAn is an open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data.

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  1. seqan3 seqan3 Public

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

    C++ 400 81

  2. seqan seqan Public

    SeqAn's official repository.

    C++ 470 171

Repositories

Showing 10 of 47 repositories
  • lambda Public

    LAMBDA – the Local Aligner for Massive Biological DatA

    seqan/lambda’s past year of commit activity
    C++ 77 20 2 1 Updated Aug 26, 2024
  • seqan3 Public

    The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

    seqan/seqan3’s past year of commit activity
    C++ 400 81 27 0 Updated Aug 23, 2024
  • chopper Public

    A tool for partitioning a set of sequences into similar batches.

    seqan/chopper’s past year of commit activity
    C++ 9 BSD-3-Clause 9 6 2 Updated Aug 22, 2024
  • seqan/www.seqan.de’s past year of commit activity
    SCSS 0 MIT 9 2 1 Updated Aug 19, 2024
  • sharg-parser Public

    The modern argument parser for c++ tools

    seqan/sharg-parser’s past year of commit activity
    C++ 10 7 15 6 Updated Aug 19, 2024
  • hibf Public

    HIBF and IBF

    seqan/hibf’s past year of commit activity
    C++ 4 2 4 5 Updated Aug 19, 2024
  • seqan Public

    SeqAn's official repository.

    seqan/seqan’s past year of commit activity
    C++ 470 171 102 4 Updated Aug 16, 2024
  • raptor Public

    A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences.

    seqan/raptor’s past year of commit activity
    C++ 52 18 8 3 Updated Aug 16, 2024
  • hibf_benchmarks Public

    WIP HIBF benchmarks

    seqan/hibf_benchmarks’s past year of commit activity
    Python 0 BSD-3-Clause 2 1 1 Updated Aug 13, 2024
  • app-template Public template

    This template comes pre-configured with various SeqAn libraries and a basic Continuous Integration setup. It is designed to provide a robust starting point for your projects, while offering the flexibility to customize and adapt to your specific requirements.

    seqan/app-template’s past year of commit activity
    CMake 6 9 19 0 Updated Aug 12, 2024