Merge branch 'master' into seqerakit-docs-port

.gitignore

@@ -31,3 +31,7 @@ internal/tmp
 
 # Local Netlify folder
 .netlify
+
+# OSS repo clones
+multiqc_docs/multiqc_repo
+wave_docs/wave_repo

.gitmodules

@@ -1,6 +0,0 @@
-[submodule "wave_docs/wave_repo"]
-	path = wave_docs/wave_repo
-	url = https://github.com/seqeralabs/wave
-[submodule "multiqc_docs/multiqc_repo"]
-	path = multiqc_docs/multiqc_repo
-	url = https://github.com/MultiQC/MultiQC

internal/fetch-docs-oss.mjs

@@ -0,0 +1,62 @@
+import git from "simple-git";
+import fs from "fs-extra";
+import "dotenv/config";
+import path from "path";
+import { fileURLToPath } from "url";
+
+const __filename = fileURLToPath(import.meta.url);
+const __dirname = path.dirname(__filename);
+
+const repositories = [
+  {
+    name: 'multiqc',
+    url: 'https://github.com/MultiQC/MultiQC.git',
+    path: path.join(__dirname, "..", "multiqc_docs", "multiqc_repo")
+  },
+  {
+    name: 'wave',
+    url: 'https://github.com/seqeralabs/wave.git',
+    path: path.join(__dirname, "..", "wave_docs", "wave_repo")
+  }
+];
+
+// Function to clone or update a repository
+async function cloneOrUpdateRepo({ name, url, path: repoPath }) {
+  const exists = await fs.pathExists(repoPath + "/.git");
+
+  try {
+    if (exists) {
+      console.log(`${name}: Cloned repo already exists, will pull latest changes`);
+      await git(repoPath).pull();
+      console.log(`✅ ${name}: Pulled latest changes`);
+    } else {
+      console.log(`${name}: Cloning into ${repoPath}`);
+      await git().clone(url, repoPath);
+      console.log(`✅ ${name}: Cloned`);
+    }
+  } catch (error) {
+    console.error(`❌ Error processing ${repo.name}:`);
+    console.error(error.message);
+    if (exists) {
+      console.error(`Try removing the directory: ${repoPath}`);
+    }
+    // Exit with error code 1 to stop any subsequent npm scripts
+    process.exit(1);
+  }
+
+  return git(repoPath);
+}
+
+// Clone/update all repositories
+async function processRepositories() {
+  for (const repo of repositories) {
+    try {
+      await cloneOrUpdateRepo(repo);
+    } catch (error) {
+      console.error(`❌ Error processing ${repo.name}:`, error);
+    }
+  }
+}
+
+// Execute
+processRepositories().catch(console.error);

package.json

@@ -4,8 +4,10 @@
   "private": true,
   "scripts": {
     "docusaurus": "docusaurus",
+    "prestart": "npm run fetch-docs-oss",
     "start": "docusaurus start",
     "dev": "npm run start",
+    "prebuild": "npm run fetch-docs-oss",
     "build": "docusaurus build",
     "swizzle": "docusaurus swizzle",
     "deploy": "docusaurus deploy",
@@ -15,15 +17,16 @@
     "write-heading-ids": "docusaurus write-heading-ids",
     "typecheck": "tsc",
     "fetch-docs": "node internal/fetch-docs.mjs",
+    "fetch-docs-oss": "node internal/fetch-docs-oss.mjs",
     "sanitize-existing": "node internal/sanitize-existing.mjs",
     "markdownlint": "markdownlint-cli2 'platform_versioned_docs/**/*.mdx' 'wave_docs/**/*.mdx' 'fusion_docs/**/*.mdx' --config .markdownlint-cli2.cjs"
   },
   "dependencies": {
-    "@docusaurus/core": "^3.6.0",
-    "@docusaurus/faster": "^3.5.2",
-    "@docusaurus/plugin-google-gtag": "^3.6.0",
-    "@docusaurus/plugin-google-tag-manager": "^3.6.0",
-    "@docusaurus/preset-classic": "^3.6.0",
+    "@docusaurus/core": "^3.6.1",
+    "@docusaurus/faster": "^3.6.1",
+    "@docusaurus/plugin-google-gtag": "^3.6.1",
+    "@docusaurus/plugin-google-tag-manager": "^3.6.1",
+    "@docusaurus/preset-classic": "^3.6.1",
     "@mdx-js/react": "^3.0.0",
     "clsx": "^1.2.1",
     "docusaurus-remark-plugin-tab-blocks": "^3.1.0",

src/theme/DocSidebar/Desktop/ProductSwitcher/VersionSwitcher.tsx

@@ -69,15 +69,18 @@ const VersionSwitcher = ({ isOpen, setIsOpen }) => {
           })}
         >
           {items?.map((version) => (
-            <Link
+            <div
               key={version.name}
-              to={`${version.path}${urlSuffix}`} // Append the suffix to the version path
-              className={styles.item}
               onClick={() => handleSelectVersion(version.name)}
             >
-              v{version.label}{" "}
-              {version.label === versions[0].label ? " (current)" : ""}
-            </Link>
+              <Link
+                to={`${version.path}${urlSuffix}`} // Append the suffix to the version path
+                className={styles.item}
+              >
+                v{version.label}{" "}
+                {version.label === versions[0].label ? " (current)" : ""}
+              </Link>
+            </div>
           ))}
         </div>
       )}