SeqKit v2.6.0

Changes

• SeqKit v2.6.0 - 2023-11-09
  • seqkit:
    • add the shortcut -X for the flag --infile-list.
  • seqkit common:
    • add a new flag -e/--check-embedded-seqs for detecting embedded sequences.
    • for matching by sequences: reduced the memory occupation and corrected numbers in the log. #416
  • seqkit stat:
    • add a new column AvgQual for average quality score. #411
  • seqkit split2:
    • fix the panic for invalid input.
  • seqkit subseq:
    • add a new flag -R/--region-coord for appending coordinates to sequence ID for -r/--region. #413
  • seqkit locate:
    • add a new flag -s/--max-len-to-show to show at most X characters for the search pattern or matched sequences.
  • seqkit seq:
    • change the nucleotide color theme. #412