Skip to content

Releases: shenwei356/taxonkit

TaxonKit v0.1.8-dev

25 Apr 12:57
Compare
Choose a tag to compare
TaxonKit v0.1.8-dev Pre-release
Pre-release

Changelog

  • taxonkit lineage, add an extra column of lineage in Taxid. #3 e.g.,

      349741  cellular organisms;Bacteria;PVC group;Verrucomicrobia;Verrucomicrobiae;Verrucomicrobiales;Akkermansiaceae;Akkermansia;Akkermansia muciniphila;Akkermansia muciniphila ATCC BAA-835  131567;2;1783257;74201;203494;48461;1647988;239934;239935;349741
    

TaxonKit v0.1.7

22 Jan 03:32
Compare
Choose a tag to compare
  • taxonkit reformat: supports reading stdin from output of taxonkit lineage,
    reformated lineages are appended to input data.

TaxonKit v0.1.6

27 Nov 15:24
Compare
Choose a tag to compare
  • remove flag -f/--formated-rank from taxonkit lineage,
    using taxonkit reformat can archieve same result.

TaxonKit v0.1.5

27 Nov 13:24
Compare
Choose a tag to compare
  • reorganize code and flags and update docs.

TaxonKit v0.1.4

17 Nov 06:11
Compare
Choose a tag to compare
  • add flag --fill for taxonkit reformat, which estimates and fills missing ranks with original lineage information

TaxonKit v0.1.3

16 Nov 15:06
Compare
Choose a tag to compare
  • add command of taxonkit reformat which reformats full lineage to custom format

TaxonKit v0.1.2

10 Nov 17:37
Compare
Choose a tag to compare
  • add command of taxonkit lineage, users can query lineage of given taxon IDs from file

TaxonKit v0.1.1

10 Nov 10:40
Compare
Choose a tag to compare
  • add feature of taxonkit list, users can choose output in readable JSON
    format by flag --json so the taxonomy tree could be collapse and
    uncollapse in modern text editor.
    taxon.json.png

taxonkit v0.1

01 Nov 16:36
Compare
Choose a tag to compare
  • first release