Code

Kdn adding and diagnostic filtering#2383

Code

Merged

nbollis merged 29 commits intosmith-chem-wisc:mastersmith-chem-wisc/MetaMorpheus:masterfrom RayMSMS:Kdn-Adding-and-diagnostic-filteringRayMSMS/MetaMorpheus:Kdn-Adding-and-diagnostic-filteringCopy head branch name to clipboardAug 2, 2024

+1,413-387

Commits

Commits on May 28, 2024

• The lie's comment about the glyco-searching

  RayMSMS

  committed
  62013c0

Commits on Jun 4, 2024

• Try to add the search summary information (PSMs, protein group, glycoPsms, Level1-glycoPsms) into the "AllResult.txt" file for glycoSearch

  Show description for 2e99da2
  RayMSMS

  committed
  2e99da2

• Merge branch 'master' into glyco-search-comment

  nbollis

  authored
  d1da509

Commits on Jun 5, 2024

• Merge branch 'master' into glyco-search-comment

  nbollis

  authored
  640c503

• add the contaminant tester

  RayMSMS

  committed
  a0d2377

• Merge branch 'glyco-search-comment' of https://github.com/RayMSMS/MetaMorpheus into glyco-search-comment

  RayMSMS

  committed
  88ce7b5

Commits on Jun 6, 2024

• Delet the unused constructor of Node class to cheat the coverage check

  RayMSMS

  committed
  9ff4c2f

• Fix the Fdr filter (initial: < 0.1, now <= 0.1)

  RayMSMS

  committed
  02bcfce

Commits on Jun 10, 2024

• Try to pass the coverage test, add the docoy filtering tester

  Show description for 206fd27
  RayMSMS

  committed
  206fd27

Commits on Jun 13, 2024

• Merge branch 'master' into glyco-search-comment

  nbollis

  authored
  fdd58a3

Commits on Jun 26, 2024

• Merge branch 'master' into glyco-search-comment

  nbollis

  authored
  8b2898a

Commits on Jul 2, 2024

• update 7/2/2024

  Show description for 8a7f48d
  RayMSMS

  committed
  8a7f48d

• Merge branch 'glyco-search-comment' of https://github.com/RayMSMS/MetaMorpheus into glyco-search-comment

  RayMSMS

  committed
  aebf0ec

Commits on Jul 3, 2024

• Search the new sugar "Kdn"

  RayMSMS

  committed
  2d7467c

• In order to pass the converage, add the new model in the tester "N-glycan fragment"

  RayMSMS

  committed
  359154d

Commits on Jul 4, 2024

• Update 7/4/2024

  Show description for 09965d8
  RayMSMS

  committed
  09965d8

Commits on Jul 5, 2024

• update 7/5/2024

  Show description for e5f3f49
  RayMSMS

  committed
  e5f3f49

• Merge branch 'master' into glyco-search-comment

  RayMSMS

  authored
  3952bf1

• wrting fuction update and tester

  RayMSMS

  committed
  3b80d8b

• Merge in my comment branch

  Show description for 7c2c7ef
  RayMSMS

  committed
  7c2c7ef

Commits on Jul 10, 2024

• update 7/10

  Show description for 9a038a1
  RayMSMS

  committed
  9a038a1

• Merge branch 'master' into Kdn-Adding-and-diagnostic-filtering

  RayMSMS

  authored
  9d1c68a

• fix the issue: The glycan database need to reload by the tester

  RayMSMS

  committed
  ea690b9

• Merge branch 'Kdn-Adding-and-diagnostic-filtering' of https://github.com/RayMSMS/MetaMorpheus into Kdn-Adding-and-diagnostic-filtering

  RayMSMS

  committed
  f3d2831

Commits on Jul 11, 2024

• update 7/11/2024 try to fix the failed test issue

  Show description for ef33bb5
  RayMSMS

  committed
  ef33bb5

Commits on Jul 24, 2024

• update 7/24

  Show description for 2d5db1b
  RayMSMS

  committed
  2d5db1b

Commits on Jul 30, 2024

• Merge branch 'master' into Kdn-Adding-and-diagnostic-filtering

  RayMSMS

  authored
  7019df1

• update 7/30

  Show description for 72521e8
  RayMSMS

  committed
  72521e8

• Merge branch 'Kdn-Adding-and-diagnostic-filtering' of https://github.com/RayMSMS/MetaMorpheus into Kdn-Adding-and-diagnostic-filtering

  RayMSMS

  committed
  48267d9