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PsmFromTsv Reader that also will work for RNA #621

PsmFromTsv Reader that also will work for RNA

PsmFromTsv Reader that also will work for RNA #621

Triggered via pull request November 9, 2023 17:18
Status Failure
Total duration 2m 51s
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7 errors and 7 warnings
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L506
Argument 1: cannot convert from 'ref Proteomics.Fragmentation.Product' to 'ref Omics.Fragmentation.IProduct'
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L623
'IProduct' does not contain a definition for 'AminoAcidPosition' and no accessible extension method 'AminoAcidPosition' accepting a first argument of type 'IProduct' could be found (are you missing a using directive or an assembly reference?)
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L624
Argument 1: cannot convert from 'ref Proteomics.Fragmentation.Product' to 'ref Omics.Fragmentation.IProduct'
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L506
Argument 1: cannot convert from 'ref Proteomics.Fragmentation.Product' to 'ref Omics.Fragmentation.IProduct'
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L623
'IProduct' does not contain a definition for 'AminoAcidPosition' and no accessible extension method 'AminoAcidPosition' accepting a first argument of type 'IProduct' could be found (are you missing a using directive or an assembly reference?)
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L624
Argument 1: cannot convert from 'ref Proteomics.Fragmentation.Product' to 'ref Omics.Fragmentation.IProduct'
build
Process completed with exit code 1.
build
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-dotnet@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build: mzLib/Omics/Fragmentation/MatchedFragmentIon.cs#L76
Nullability of type of parameter 'obj' doesn't match overridden member (possibly because of nullability attributes).
build: mzLib/MassSpectrometry/MzSpectra/MzSpectrum.cs#L767
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
build: mzLib/MassSpectrometry/MzSpectra/MzSpectrum.cs#L774
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
build: mzLib/Omics/Fragmentation/MatchedFragmentIon.cs#L76
Nullability of type of parameter 'obj' doesn't match overridden member (possibly because of nullability attributes).
build: mzLib/MassSpectrometry/MzSpectra/MzSpectrum.cs#L767
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
build: mzLib/MassSpectrometry/MzSpectra/MzSpectrum.cs#L774
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.