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PsmFromTsv Reader that also will work for RNA #626

PsmFromTsv Reader that also will work for RNA

PsmFromTsv Reader that also will work for RNA #626

Triggered via pull request November 15, 2023 21:23
Status Failure
Total duration 2m 22s
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10 errors and 11 warnings
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L95
Property or indexer 'PsmFromTsv.PeptideMonoMass' cannot be assigned to -- it is read only
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L115
Property or indexer 'PsmFromTsv.ProteinAccession' cannot be assigned to -- it is read only
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L116
Property or indexer 'PsmFromTsv.ProteinName' cannot be assigned to -- it is read only
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L122
Property or indexer 'PsmFromTsv.PeptideDescription' cannot be assigned to -- it is read only
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L122
'SpectrumMatchFromTsvHeader' does not contain a definition for 'PeptideDesicription'
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L122
'SpectrumMatchFromTsvHeader' does not contain a definition for 'PeptideDesicription'
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L123
The name 'StartAndEndResiduesInProtein' does not exist in the current context
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L124
Property or indexer 'PsmFromTsv.PreviousAminoAcid' cannot be assigned to -- it is read only
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L125
Property or indexer 'PsmFromTsv.NextAminoAcid' cannot be assigned to -- it is read only
build: mzLib/Proteomics/PSM/PsmFromTsv.cs#L166
The name 'SpectrumMatchFromTsvHeader_Glyco' does not exist in the current context
build
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/setup-dotnet@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build: mzLib/MassSpectrometry/MzSpectra/MzSpectrum.cs#L767
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
build: mzLib/MassSpectrometry/MzSpectra/MzSpectrum.cs#L774
The annotation for nullable reference types should only be used in code within a '#nullable' annotations context.
build: mzLib/Omics/Fragmentation/MatchedFragmentIon.cs#L85
Nullability of type of parameter 'obj' doesn't match overridden member (possibly because of nullability attributes).
build: mzLib/Omics/Fragmentation/Product.cs#L90
Nullability of type of parameter 'obj' doesn't match overridden member (possibly because of nullability attributes).
build: mzLib/Omics/SpectrumMatch/SpectrumMatchFromTsv.cs#L367
Cannot convert null literal to non-nullable reference type.
build: mzLib/Omics/SpectrumMatch/SpectrumMatchFromTsv.cs#L121
Possible null reference assignment.
build: mzLib/Omics/SpectrumMatch/SpectrumMatchFromTsv.cs#L134
Possible null reference assignment.
build: mzLib/Omics/SpectrumMatch/SpectrumMatchFromTsv.cs#L137
Possible null reference assignment.
build: mzLib/Omics/SpectrumMatch/SpectrumMatchFromTsv.cs#L140
Possible null reference assignment.
build: mzLib/Omics/SpectrumMatch/SpectrumMatchFromTsv.cs#L143
Possible null reference assignment.