Fixing biopython compatibility issue by reverting to 1.81 #622
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specify biopython==1.81 version while installing
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The existing version of the OmegaFold notebook on the ColabFold repository doesn't work because of compatibility issues with biopython. Reverting to biopython 1.81 during installation fixes the issue. The maintainers would have to update the link to the colab notebook, so that this change can be reflected for those trying to run this on Google Colab.
The original line:
%shell pip -q install py3Dmol biopythonis updated to:
%shell pip -q install py3Dmol biopythonin the installation block of the OmegaFold notebook located at ColabFold/beta/omegafold.ipynb