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MRG: when lingroups are provided, use them for csv_summary #5717

MRG: when lingroups are provided, use them for csv_summary

MRG: when lingroups are provided, use them for csv_summary #5717

Triggered via pull request September 17, 2024 16:25
Status Success
Total duration 13m 36s
Artifacts 1

rust.yml

on: pull_request
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coverage
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3 errors and 115 warnings
Check if wasm-pack builds a valid package for the sourmash crate
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Run tests under wasm32-wasi
The process '/home/runner/.cargo/bin/cargo' failed with exit code 101
Lints (stable)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Lints (stable)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Lints (stable)
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Lints (stable)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Lints (stable)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Lints (stable)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Check
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Lints (beta)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Lints (beta)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Lints (beta)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Lints (beta)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Lints (beta)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Lints (beta)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Check if wasm-pack builds a valid package for the sourmash crate
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Check if wasm-pack builds a valid package for the sourmash crate
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Check if wasm-pack builds a valid package for the sourmash crate
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Check if wasm-pack builds a valid package for the sourmash crate
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Check if wasm-pack builds a valid package for the sourmash crate
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Run tests under wasm32-wasi
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Run tests under wasm32-wasi
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
Run tests under wasm32-wasi
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Run tests under wasm32-wasi
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Run tests under wasm32-wasi
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Run tests under wasm32-wasi
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
Run tests under wasm32-wasi
the `wasm32-wasi` target is being renamed to `wasm32-wasip1` and the `wasm32-wasi` target will be removed from nightly in October 2024 and removed from stable Rust in January 2025
Run tests under wasm32-wasi
`cfg-if` (lib) generated 1 warning
Run tests under wasm32-wasi
`wasi` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`libm` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`getrandom` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`rand_core` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`memchr` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`ppv-lite86` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`bytemuck` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`num-integer` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
the `wasm32-wasi` target is being renamed to `wasm32-wasip1` and the `wasm32-wasi` target will be removed from nightly in October 2024 and removed from stable Rust in January 2025
Run tests under wasm32-wasi
`cfg-if` (lib) generated 1 warning
Run tests under wasm32-wasi
`libc` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`lazy_static` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`wasi` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`memchr` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`getrandom` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`rand_core` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`libm` (lib) generated 1 warning (1 duplicate)
Run tests under wasm32-wasi
`ppv-lite86` (lib) generated 1 warning (1 duplicate)
test (beta)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (beta)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
test (beta)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (beta)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (beta)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (beta)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (beta): src/core/src/collection.rs#L239
unused import: `crate::Result`
test (beta)
`sourmash` (lib test) generated 1 warning (run `cargo fix --lib -p sourmash --tests` to apply 1 suggestion)
test (stable)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (stable)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
test (stable)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (stable)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (stable)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (stable)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (stable): src/core/src/collection.rs#L239
unused import: `crate::Result`
test (stable)
`sourmash` (lib test) generated 1 warning (run `cargo fix --lib -p sourmash --tests` to apply 1 suggestion)
test (macos)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (macos)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
test (macos): src/core/src/collection.rs#L239
unused import: `crate::Result`
test (macos)
`sourmash` (lib test) generated 1 warning (run `cargo fix --lib -p sourmash --tests` to apply 1 suggestion)
test (macos)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (macos)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (macos)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (macos)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (windows)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test (windows)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
test (windows): src/core/src/collection.rs#L239
unused import: `crate::Result`
test (windows)
`sourmash` (lib test) generated 1 warning (run `cargo fix --lib -p sourmash --tests` to apply 1 suggestion)
test (windows)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (windows)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test (windows)
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test (windows)
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Publish (dry-run)
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Publish (dry-run)
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Publish (dry-run)
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Publish (dry-run)
Unexpected input(s) 'crate-name', 'version-tag-prefix', valid inputs are ['package', 'exclude', 'manifest-path', 'feature-group', 'features', 'verbose', 'release-type', 'rust-toolchain', 'rust-target', 'shared-key', 'prefix-key', 'github-token']
Check if cbindgen runs cleanly for generating the C headers
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Check if cbindgen runs cleanly for generating the C headers
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Check if cbindgen runs cleanly for generating the C headers
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Check if cbindgen runs cleanly for generating the C headers
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Check if cbindgen runs cleanly for generating the C headers
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Check if cbindgen runs cleanly for generating the C headers
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Check if cbindgen runs cleanly for generating the C headers
Unable to download cbindgen == 0.20.0 from the tool cache: Error: Unexpected HTTP response: 403
minimum_rust_version
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/cargo@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
minimum_rust_version
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minimum_rust_version
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minimum_rust_version
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minimum_rust_version
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minimum_rust_version
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coverage
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
coverage
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coverage
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coverage
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coverage
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coverage
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test_all_features
The following actions uses node12 which is deprecated and will be forced to run on node16: actions-rs/toolchain@v1, actions-rs/install@v0.1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_all_features
The following actions use a deprecated Node.js version and will be forced to run on node20: actions-rs/toolchain@v1, actions-rs/install@v0.1. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
test_all_features
Unable to download cargo-all-features == latest from the tool cache: Error: Unexpected HTTP response: 403
test_all_features
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test_all_features
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test_all_features
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
test_all_features
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/

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