MRG: when lingroups are provided, use them for csv_summary
#7371
Workflow file for this run
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| name: cibuildwheel | |
| permissions: write-all | |
| on: | |
| push: | |
| branches: [latest] | |
| tags: v* | |
| pull_request: | |
| schedule: | |
| - cron: "0 0 * * *" # daily | |
| jobs: | |
| build_wheels: | |
| name: Build wheels for ${{ matrix.os }}-${{ matrix.arch }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| build: [ | |
| linux-x86_64, | |
| macos-x86_64, | |
| macos-arm64, | |
| ] | |
| include: | |
| - build: linux-x86_64 | |
| os: ubuntu-20.04 | |
| arch: x86_64 | |
| macos_target: '' | |
| - build: macos-x86_64 | |
| os: macos-latest | |
| arch: x86_64 | |
| macos_target: 'MACOSX_DEPLOYMENT_TARGET=11.0 CARGO_BUILD_TARGET=x86_64-apple-darwin' | |
| - build: macos-arm64 | |
| os: macos-latest | |
| arch: arm64 | |
| macos_target: 'MACOSX_DEPLOYMENT_TARGET=11.0 CARGO_BUILD_TARGET=aarch64-apple-darwin' | |
| fail-fast: false | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| name: Install Python | |
| with: | |
| python-version: '3.10' | |
| - name: Build wheels | |
| uses: pypa/cibuildwheel@v2.21.1 | |
| env: | |
| CIBW_ENVIRONMENT_MACOS: ${{ matrix.macos_target }} | |
| CIBW_ARCHS_LINUX: ${{ matrix.arch }} | |
| CIBW_ARCHS_MACOS: ${{ matrix.arch }} | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: wheel-${{ matrix.build }}-${{ matrix.os }} | |
| path: './wheelhouse/sourmash*.whl' | |
| build_wasm: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Build wheels | |
| uses: pypa/cibuildwheel@v2.21.1 | |
| env: | |
| CIBW_PLATFORM: pyodide | |
| CIBW_BUILD: 'cp312-pyodide_wasm32' | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: wheel-wasm | |
| path: './wheelhouse/sourmash*.whl' | |
| release: | |
| name: Publish wheels | |
| runs-on: ubuntu-20.04 | |
| if: startsWith(github.ref, 'refs/tags/v') | |
| needs: [build_wheels, build_wasm] | |
| steps: | |
| - name: Fetch wheels from artifacts | |
| id: fetch_artifacts | |
| uses: actions/download-artifact@v4 | |
| with: | |
| path: 'wheels/' | |
| # if it matches a Python release tag, upload to github releases | |
| - name: Release | |
| uses: softprops/action-gh-release@v2 | |
| with: | |
| files: | | |
| ${{steps.fetch_artifacts.outputs.download-path}}/wheel-*/* |