implement --force

sourmash-bio · Aug 7, 2022 · 0f31c40 · 0f31c40
1 parent b721680
commit 0f31c40
Showing 1 changed file with 2 additions and 4 deletions.
diff --git a/src/sourmash/tax/__main__.py b/src/sourmash/tax/__main__.py
@@ -377,11 +377,9 @@ def prepare(args):
 
 
 def grep(args):
-    # check multiple tax files, sqldb @CTB
-
     term = args.pattern
-    tax_assign = MultiLineageDB.load(args.taxonomy_csv)
-    # force? @CTB
+    tax_assign = MultiLineageDB.load(args.taxonomy_csv,
+                                     force=args.force)
 
     silent = args.silent or args.count