fix benchmarks

sourmash-bio · Dec 9, 2020 · d3510e4 · d3510e4
1 parent 154bf2f
commit d3510e4
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Showing 3 changed files with 9 additions and 5 deletions.
diff --git a/asv.conf.json b/asv.conf.json
@@ -3,12 +3,16 @@
     "project": "sourmash",
     "project_url": "https://github.com/dib-lab/sourmash",
     "repo": ".",
-    "branches": ["latest"], // for git
+    "branches": ["latest"],
     "dvcs": "git",
     "environment_type": "virtualenv",
     "pythons": ["3.7"],
     "env_dir": ".asv/env",
     "results_dir": ".asv/results",
     "html_dir": ".asv/html",
-    "build_cache_size": 8
+    "build_cache_size": 8,
+    "build_command": [
+      "python -m pip install build",
+      "python -m build --sdist --wheel --outdir {build_cache_dir} {build_dir}"
+    ]
 }
diff --git a/benchmarks/benchmarks.py b/benchmarks/benchmarks.py
@@ -48,11 +48,11 @@ def time_add_many(self):
         mh = self.mh
         mh.add_many(list(range(1000)))
 
-    def time_compare(self):
+    def time_similarity(self):
         mh = self.mh
         other_mh = self.populated_mh
         for i in range(500):
-            mh.compare(other_mh)
+            mh.similarity(other_mh)
 
     def time_count_common(self):
         mh = self.mh

diff --git a/src/core/Cargo.toml b/src/core/Cargo.toml
@@ -33,7 +33,7 @@ getset = "0.1.1"
 log = "0.4.8"
 md5 = "0.7.0"
 murmurhash3 = "0.0.5"
-niffler = { version = "2.2.0", default-features = false, features = [ "gz" ] }
+niffler = { version = "2.3.1", default-features = false, features = [ "gz" ] }
 nohash-hasher = "0.2.0"
 num-iter = "0.1.41"
 once_cell = "1.3.1"