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use same wording for dayhoff/hp as for dna/protein
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bluegenes authored Apr 4, 2022
1 parent 1cc055b commit f98d4d4
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions src/sourmash/cli/utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -17,20 +17,20 @@ def add_moltype_args(parser):

parser.add_argument(
'--dayhoff', dest='dayhoff', action='store_true',
help='build Dayhoff-encoded amino acid signatures'
help='choose Dayhoff-encoded amino acid signatures'
)
parser.add_argument(
'--no-dayhoff', dest='dayhoff', action='store_false',
help='do not build Dayhoff-encoded amino acid signatures')
help='do not choose Dayhoff-encoded amino acid signatures')
parser.set_defaults(dayhoff=False)

parser.add_argument(
'--hp', '--hydrophobic-polar', dest='hp', action='store_true',
help='build hydrophobic-polar-encoded amino acid signatures'
help='choose hydrophobic-polar-encoded amino acid signatures'
)
parser.add_argument(
'--no-hp', '--no-hydrophobic-polar', dest='hp', action='store_false',
help='do not build hydrophobic-polar-encoded amino acid signatures')
help='do not choose hydrophobic-polar-encoded amino acid signatures')
parser.set_defaults(hp=False)

parser.add_argument(
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