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MRG: add label output & input options to compare and plot, for better customization #2598

Merged
merged 22 commits into from
Feb 6, 2024
Merged

MRG: add label output & input options to compare and plot, for better customization #2598

merged 22 commits into from
Feb 6, 2024

Commits on Sep 28, 2023

  1. some progress made

    @ctb
    ctb committed Sep 28, 2023
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  2. simplify code, fix problem

    @ctb
    ctb committed Sep 28, 2023
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  3. ok I think this works

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    ctb committed Sep 28, 2023
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  4. update docs

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    ctb committed Sep 28, 2023
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  5. update homework

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    ctb committed Sep 28, 2023
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  6. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o refactor_plot_indices
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    ctb committed Sep 28, 2023
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Commits on Sep 29, 2023

  1. cleanup and comment plot tests

    @ctb
    ctb committed Sep 29, 2023
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  2. add a bunch of tests

    @ctb
    ctb committed Sep 29, 2023
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  3. bump for tests

    @ctb
    ctb committed Sep 29, 2023
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  4. add --labels-to to sourmash compare

    @ctb
    ctb committed Sep 29, 2023
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  5. add --labels-from to sourmash plot

    @ctb
    ctb committed Sep 29, 2023
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  6. update docs

    @ctb
    ctb committed Sep 29, 2023
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  7. fewer loops are good

    @ctb
    ctb committed Sep 29, 2023
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  8. use sort_order instead of order in CSV

    @ctb
    ctb committed Sep 29, 2023
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  9. write a few basic tests

    @ctb
    ctb committed Sep 29, 2023
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Commits on Feb 5, 2024

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o compare_labels
    @ctb
    ctb committed Feb 5, 2024
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  2. add test for fail condition

    @ctb
    ctb committed Feb 5, 2024
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  3. upd command line text

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    ctb committed Feb 5, 2024
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  4. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o compare_labels
    @ctb
    ctb committed Feb 5, 2024
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  5. fix merge mistakes

    @ctb
    ctb committed Feb 5, 2024
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  6. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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    pre-commit-ci[bot] committed Feb 5, 2024
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Commits on Feb 6, 2024

  1. Merge branch 'latest' of https://github.com/sourmash-bio/sourmash int… 

    …o compare_labels
    @ctb
    ctb committed Feb 6, 2024
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