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92 Open 124 Closed
92 Open 124 Closed
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Issues list

no output from manysearch for failed aligments
#542 opened Dec 11, 2024 by peterjc
2
Inconsistent column order output from manysearch
#539 opened Dec 4, 2024 by peterjc
2
sourmash scripts singlesketch output differs from sourmash sketch
#538 opened Dec 4, 2024 by peterjc
5
Feature Request: Multi-database support options for sourmash gather
#536 opened Dec 1, 2024 by tnmquann
3
can we allow singlesketch to take multiple input files?
#535 opened Nov 29, 2024 by ctb
singlesketch fails on empty file
#534 opened Nov 29, 2024 by ctb
cannot pass directory to multisearch or pairwise
#533 opened Nov 21, 2024 by peterjc
4
update code to use min_max_scaled
#527 opened Nov 16, 2024 by ctb
gather and manysearch benchmarks for branchwater plugin v0.9.11
#525 opened Nov 16, 2024 by ctb
note in docs that scaled factor should significantly improve speed, after i/o
#524 opened Nov 16, 2024 by ctb
add .zip output to singlesketch
#521 opened Nov 15, 2024 by ctb
fix moltype handling in singlesketch
#520 opened Nov 15, 2024 by ctb
improve error reporting when a standalone manifest can't be loaded
#512 opened Nov 12, 2024 by ctb
refactor, test, and benchmark different scaled factors across the plugin
#510 opened Nov 11, 2024 by ctb
1
fastmultigather x rocksdb doesn't actually use multiple cores
#503 opened Nov 8, 2024 by ctb
6
error message: "not implemented: only one Signature currently allowed when using 'load_sig'"
#501 opened Nov 6, 2024 by ctb
1
fastmultigather produces different results when searching against a normal zip-type database and a Rocksdb inverted index database
#483 opened Oct 17, 2024 by JiaweiShen1116
1
13
revisit memory fix for fastmultigather - use into_par_iter properly
#482 opened Oct 17, 2024 by ctb
1
consider support env_logger, perhaps via features
#480 opened Oct 17, 2024 by ctb
gather and manysearch benchmarks for plugin v0.9.6 and v0.9.8
#479 opened Oct 16, 2024 by ctb
8
add tests for relative paths in pathlists and manifests
#478 opened Oct 16, 2024 by ctb
benchmark subsets of databases via standalone manifests
#476 opened Oct 16, 2024 by ctb
consolidate gather stats calculations
#473 opened Oct 13, 2024 by ctb
1
validate gather with mismatched scaled values
#469 opened Oct 12, 2024 by ctb
10-fold manysearch performance slowdown between v0.9.5 and v0.9.6
#463 opened Oct 2, 2024 by ctb
4
ProTip! Exclude everything labeled bug with -label:bug.