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BUG: Fix radial profile fitting when NaN in data #3246

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merged 4 commits into from
Oct 25, 2024

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pllim
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@pllim pllim commented Oct 22, 2024

Description

This pull request is to address profile fitting crashing when NaN is within aperture data.

Change log entry

  • Is a change log needed? If yes, is it added to CHANGES.rst? If you want to avoid merge conflicts,
    list the proposed change log here for review and add to CHANGES.rst before merge. If no, maintainer
    should add a no-changelog-entry-needed label.

Checklist for package maintainer(s)

This checklist is meant to remind the package maintainer(s) who will review this pull request of some common things to look for. This list is not exhaustive.

  • Are two approvals required? Branch protection rule does not check for the second approval. If a second approval is not necessary, please apply the trivial label.
  • Do the proposed changes actually accomplish desired goals? Also manually run the affected example notebooks, if necessary.
  • Do the proposed changes follow the STScI Style Guides?
  • Are tests added/updated as required? If so, do they follow the STScI Style Guides?
  • Are docs added/updated as required? If so, do they follow the STScI Style Guides?
  • Did the CI pass? If not, are the failures related?
  • Is a milestone set? Set this to bugfix milestone if this is a bug fix and needs to be released ASAP; otherwise, set this to the next major release milestone. Bugfix milestone also needs an accompanying backport label.
  • After merge, any internal documentations need updating (e.g., JIRA, Innerspace)? 🐱

@pllim pllim added bug Something isn't working 💤backport-v4.0.x on-merge: backport to v4.0.x labels Oct 22, 2024
@pllim pllim added this to the 4.0.1 milestone Oct 22, 2024
@github-actions github-actions bot added imviz plugin Label for plugins common to multiple configurations labels Oct 22, 2024
phot_plugin.vue_do_aper_phot()
tbl = imviz_helper.get_aperture_photometry_results()

assert phot_plugin.result_failed_msg == ''
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This fails as such on main without this patch:

>       assert phot_plugin.result_failed_msg == ''
E       assert "Aperture pho...infeasible.')" == ''
E
E         + Aperture photometry failed: ValueError('`x0` is infeasible.')

@pllim pllim marked this pull request as ready for review October 22, 2024 21:37
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codecov bot commented Oct 22, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 88.63%. Comparing base (f552510) to head (debedb3).
Report is 5 commits behind head on main.

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #3246   +/-   ##
=======================================
  Coverage   88.63%   88.63%           
=======================================
  Files         125      125           
  Lines       18779    18779           
=======================================
  Hits        16644    16644           
  Misses       2135     2135           

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

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reproduced the error on main, and i tested your branch and this fixes it. looks good!

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Love when things are simple! Thanks!

@pllim pllim merged commit a360087 into spacetelescope:main Oct 25, 2024
25 checks passed
@pllim pllim deleted the radial-fit-no-nan branch October 25, 2024 19:22
meeseeksmachine pushed a commit to meeseeksmachine/jdaviz that referenced this pull request Oct 25, 2024
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pllim commented Oct 25, 2024

Thanks for reviews!

pllim added a commit that referenced this pull request Oct 25, 2024
…6-on-v4.0.x

Backport PR #3246 on branch v4.0.x (BUG: Fix radial profile fitting when NaN in data)
rosteen pushed a commit that referenced this pull request Oct 29, 2024
* BUG: Exclude NaNs in max and mean
calculations for radial profile fit

* TST: Add test that fails without this patch

* Add change log

* move import up
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3 participants