This R markdown document will help you get to grips with visualising and analysing metabarcoding sequence data - from importing data files, sorting and filtering data, data visualisations and summary statistics. Expected outputs include:
- A abundance graph to visualise taxa abundance across different environmental gradients (here we use vertical tree height).
- Data manipulation tools for data analysis, plotting, exporting etc.
- Summary statistics to enable decision making for appropriate statistical models.
RStudio:
Binder: