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My goal is to help science and engineering through code. In my daily practice as a software engineer, I find that sharpening scientific tools help researchers do their job more effectively. More specifically, I refine DNA sequencing data processing to assist cancer patients in Victoria, Australia.
In my hobby time, I try to create, reverse engineer, repair and upcycle electronics by improving its software guts and sharing the results with the world.
Featured work
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brainstorm/treadmill-re
Reverse engineering a dumpster dive threadmill
Assembly 4 -
igvteam/igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
Java 648 -
rust-bio/rust-htslib
This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.
Rust 312 -
brainstorm/pinha_lora_gateway
A maker-friendly LoRa mini-pcie gateway with PoE and (plenty of) PMOD
Shell 5 -
brainstorm/bio-index-formats
Rust parser for bioinformatic index formats
Rust 5 -
brainstorm/bbtrackball-rs
Experimenting with Blackberry trackball for keyboard ergonomics
Rust 26