Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

feat: add C ndarray API and refactor blas/ext/base/dnansumkbn2 #3000

Open
wants to merge 6 commits into
base: develop
Choose a base branch
from
Open
Show file tree
Hide file tree
Changes from 2 commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
137 changes: 130 additions & 7 deletions lib/node_modules/@stdlib/blas/ext/base/dnansumkbn2/README.md
Original file line number Diff line number Diff line change
Expand Up @@ -36,7 +36,7 @@ limitations under the License.
var dnansumkbn2 = require( '@stdlib/blas/ext/base/dnansumkbn2' );
```

#### dnansumkbn2( N, x, stride )
#### dnansumkbn2( N, x, strideX )

Computes the sum of double-precision floating-point strided array elements, ignoring `NaN` values and using a second-order iterative Kahan–Babuška algorithm.

Expand All @@ -53,7 +53,7 @@ The function has the following parameters:

- **N**: number of indexed elements.
- **x**: input [`Float64Array`][@stdlib/array/float64].
- **stride**: index increment for `x`.
- **strideX**: index increment for `x`.

The `N` and stride parameters determine which elements in the strided arrays are accessed at runtime. For example, to compute the sum of every other element in `x`,

Expand All @@ -80,7 +80,7 @@ var v = dnansumkbn2( 4, x1, 2 );
// returns 5.0
```

#### dnansumkbn2.ndarray( N, x, stride, offset )
#### dnansumkbn2.ndarray( N, x, strideX, offsetX )

Computes the sum of double-precision floating-point strided array elements, ignoring `NaN` values and using a second-order iterative Kahan–Babuška algorithm and alternative indexing semantics.

Expand All @@ -95,9 +95,9 @@ var v = dnansumkbn2.ndarray( 4, x, 1, 0 );

The function has the following additional parameters:

- **offset**: starting index for `x`.
- **offsetX**: starting index for `x`.

While [`typed array`][mdn-typed-array] views mandate a view offset based on the underlying `buffer`, the `offset` parameter supports indexing semantics based on a starting index. For example, to calculate the sum of every other value in `x` starting from the second value
While [`typed array`][mdn-typed-array] views mandate a view offset based on the underlying buffer, the offset parameter supports indexing semantics based on a starting index. For example, to calculate the sum of every other value in `x` starting from the second value:

```javascript
var Float64Array = require( '@stdlib/array/float64' );
Expand Down Expand Up @@ -129,11 +129,19 @@ var v = dnansumkbn2.ndarray( 4, x, 2, 1 );
<!-- eslint no-undef: "error" -->

```javascript
var discreteUniform = require( '@stdlib/random/base/discrete-uniform' ).factory;
var discreteUniform = require( '@stdlib/random/base/discrete-uniform' );
var bernoulli = require( '@stdlib/random/base/bernoulli' );
var filledarrayBy = require( '@stdlib/array/filled-by' );
var dnansumkbn2 = require( '@stdlib/blas/ext/base/dnansumkbn2' );

var x = filledarrayBy( 10, 'float64', discreteUniform( 0, 100 ) );
function clbk() {
if ( bernoulli( 0.7 ) > 0 ) {
return discreteUniform( 0, 100 );
}
return NaN;
}

var x = filledarrayBy( 10, 'float64', clbk );
console.log( x );

var v = dnansumkbn2( x.length, x, 1 );
Expand All @@ -144,8 +152,123 @@ console.log( v );

<!-- /.examples -->

<!-- C interface documentation. -->

* * *

<section class="c">

## C APIs

<!-- Section to include introductory text. Make sure to keep an empty line after the intro `section` element and another before the `/section` close. -->

<section class="intro">

</section>

<!-- /.intro -->

<!-- C usage documentation. -->

<section class="usage">

### Usage

```c
#include "stdlib/blas/ext/base/dnansumkbn2.h"
```

#### stdlib_strided_dnansumkbn2( N, \*X, strideX )

Computes the sum of double-precision floating-point strided array elements, ignoring `NaN` values and using a second-order iterative Kahan–Babuška algorithm.

```c
const double x[] = { 1.0, 2.0, 0.0/0.0, 4.0 };

double v = stdlib_strided_dnansumkbn2( 4, x, 1 );
// returns 7.0
```

The function accepts the following arguments:

- **N**: `[in] CBLAS_INT` number of indexed elements.
- **X**: `[in] double*` input array.
- **strideX**: `[in] CBLAS_INT` index increment for `X`.

```c
double stdlib_strided_dnansumkbn2( const CBLAS_INT N, const double *X, const CBLAS_INT strideX );
```

#### stdlib_strided_dnansumkbn2_ndarray( N, \*X, strideX, offsetX )

Computes the sum of double-precision floating-point strided array elements, ignoring `NaN` values and using a second-order iterative Kahan–Babuška algorithm and alternative indexing semantics.

```c
const double x[] = { 1.0, 2.0, 0.0/0.0, 4.0 };

double v = stdlib_strided_dnansumkbn2_ndarray( 4, x, 1, 0 );
// returns 7.0
```

The function accepts the following arguments:

- **N**: `[in] CBLAS_INT` number of indexed elements.
- **X**: `[in] double*` input array.
- **strideX**: `[in] CBLAS_INT` index increment for `X`.
- **offsetX**: `[in] CBLAS_INT` starting index for `X`.

```c
double stdlib_strided_dnansumkbn2_ndarray( const CBLAS_INT N, const double *X, const CBLAS_INT strideX, const CBLAS_INT offsetX );
```

</section>

<!-- /.usage -->

<!-- C API usage notes. Make sure to keep an empty line after the `section` element and another before the `/section` close. -->

<section class="notes">

</section>

<!-- /.notes -->

<!-- C API usage examples. -->

<section class="examples">

### Examples

```c
#include "stdlib/blas/ext/base/dnansumkbn2.h"
#include <stdio.h>

int main( void ) {
// Create a strided array:
const double x[] = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 0.0/0.0, 0.0/0.0 };

// Specify the number of elements:
const int N = 5;

// Specify the stride length:
const int strideX = 2;

// Compute the sum:
double v = stdlib_strided_dnansumkbn2( N, x, strideX );

// Print the result:
printf( "sum: %lf\n", v );
}
```

</section>

<!-- /.examples -->

</section>

<!-- /.c -->

<section class="references">

## References
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -94,7 +94,7 @@ static double rand_double( void ) {
* @param len array length
* @return elapsed time in seconds
*/
static double benchmark( int iterations, int len ) {
static double benchmark1( int iterations, int len ) {
double elapsed;
double x[ len ];
double v;
Expand Down Expand Up @@ -124,6 +124,43 @@ static double benchmark( int iterations, int len ) {
return elapsed;
}

/**
* Runs a benchmark.
*
* @param iterations number of iterations
* @param len array length
* @return elapsed time in seconds
*/
static double benchmark2( int iterations, int len ) {
double elapsed;
double x[ len ];
double v;
double t;
int i;

for ( i = 0; i < len; i++ ) {
if ( rand_double() < 0.2 ) {
x[ i ] = 0.0 / 0.0; // NaN
} else {
x[ i ] = ( rand_double() * 20000.0 ) - 10000.0;
}
}
v = 0.0;
t = tic();
for ( i = 0; i < iterations; i++ ) {
v = stdlib_strided_dnansumkbn2_ndarray( len, x, 1, 0 );
if ( v != v ) {
printf( "should not return NaN\n" );
break;
}
}
elapsed = tic() - t;
if ( v != v ) {
printf( "should not return NaN\n" );
}
return elapsed;
}

/**
* Main execution sequence.
*/
Expand All @@ -146,7 +183,18 @@ int main( void ) {
for ( j = 0; j < REPEATS; j++ ) {
count += 1;
printf( "# c::%s:len=%d\n", NAME, len );
elapsed = benchmark( iter, len );
elapsed = benchmark1( iter, len );
print_results( iter, elapsed );
printf( "ok %d benchmark finished\n", count );
}
}
for ( i = MIN; i <= MAX; i++ ) {
len = pow( 10, i );
iter = ITERATIONS / pow( 10, i-1 );
for ( j = 0; j < REPEATS; j++ ) {
count += 1;
printf( "# c::%s:ndarray:len=%d\n", NAME, len );
elapsed = benchmark2( iter, len );
print_results( iter, elapsed );
printf( "ok %d benchmark finished\n", count );
}
Expand Down
14 changes: 7 additions & 7 deletions lib/node_modules/@stdlib/blas/ext/base/dnansumkbn2/docs/repl.txt
Original file line number Diff line number Diff line change
@@ -1,10 +1,10 @@

{{alias}}( N, x, stride )
{{alias}}( N, x, strideX )
Computes the sum of double-precision floating-point strided array elements,
ignoring `NaN` values and using a second-order iterative Kahan–Babuška
algorithm.

The `N` and stride parameters determine which elements in the strided
The `N` and stride parameters determine which elements in the strided
array are accessed at runtime.

Indexing is relative to the first index. To introduce an offset, use a typed
Expand All @@ -20,7 +20,7 @@
x: Float64Array
Input array.

stride: integer
strideX: integer
Index increment.

Returns
Expand All @@ -47,13 +47,13 @@
-1.0


{{alias}}.ndarray( N, x, stride, offset )
{{alias}}.ndarray( N, x, strideX, offsetX )
Computes the sum of double-precision floating-point strided array elements,
ignoring `NaN` values and using a second-order iterative Kahan–Babuška
algorithm and alternative indexing semantics.

While typed array views mandate a view offset based on the underlying
buffer, the `offset` parameter supports indexing semantics based on a
buffer, the offset parameter supports indexing semantics based on a
starting index.

Parameters
Expand All @@ -64,10 +64,10 @@
x: Float64Array
Input array.

stride: integer
strideX: integer
Index increment.

offset: integer
offsetX: integer
Starting index.

Returns
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -27,7 +27,7 @@ interface Routine {
*
* @param N - number of indexed elements
* @param x - input array
* @param stride - stride length
* @param strideX - stride length
* @returns sum
*
* @example
Expand All @@ -38,15 +38,15 @@ interface Routine {
* var v = dnansumkbn2( x.length, x, 1 );
* // returns 1.0
*/
( N: number, x: Float64Array, stride: number ): number;
( N: number, x: Float64Array, strideX: number ): number;

/**
* Computes the sum of double-precision floating-point strided array elements, ignoring `NaN` values and using a second-order iterative Kahan–Babuška algorithm and alternative indexing semantics.
*
* @param N - number of indexed elements
* @param x - input array
* @param stride - stride length
* @param offset - starting index
* @param strideX - stride length
* @param offsetX - starting index
* @returns sum
*
* @example
Expand All @@ -57,15 +57,15 @@ interface Routine {
* var v = dnansumkbn2.ndarray( x.length, x, 1, 0 );
* // returns 1.0
*/
ndarray( N: number, x: Float64Array, stride: number, offset: number ): number;
ndarray( N: number, x: Float64Array, strideX: number, offsetX: number ): number;
}

/**
* Computes the sum of double-precision floating-point strided array elements, ignoring `NaN` values and using a second-order iterative Kahan–Babuška algorithm.
*
* @param N - number of indexed elements
* @param x - input array
* @param stride - stride length
* @param strideX - stride length
* @returns sum
*
* @example
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -17,21 +17,20 @@
*/

#include "stdlib/blas/ext/base/dnansumkbn2.h"
#include <stdint.h>
#include <stdio.h>

int main( void ) {
// Create a strided array:
const double x[] = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 0.0/0.0, 0.0/0.0 };

// Specify the number of elements:
const int64_t N = 5;
const int N = 5;

// Specify the stride length:
const int64_t stride = 2;
const int strideX = 2;

// Compute the sum:
double v = stdlib_strided_dnansumkbn2( N, x, stride );
double v = stdlib_strided_dnansumkbn2( N, x, strideX );

// Print the result:
printf( "sum: %lf\n", v );
Expand Down
Loading
Loading