new force constraints options patch of quickMD-nf workflow #53
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| name: "build" | |
| on: [push] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v1 | |
| - name: Set up Docker Buildx | |
| uses: docker/setup-buildx-action@v1 | |
| - name: Login to GitHub Container Registry | |
| uses: docker/login-action@v1 | |
| with: | |
| registry: ghcr.io | |
| username: ${{ github.repository_owner }} | |
| password: ${{ secrets.GHCR_TOKEN }} | |
| - name: Build Docker image | |
| uses: docker/build-push-action@v2 | |
| with: | |
| context: . | |
| file: containers/Dockerfile | |
| platforms: linux/amd64 | |
| load: true | |
| push: false | |
| tags: ghcr.io/${{ github.repository }}:1.1.2, ghcr.io/${{ github.repository }}:latest | |
| - name: 'Install Nextflow' | |
| uses: stracquadaniolab/gh-action-setup-nextflow@v0.2.0 | |
| - name: 'Testing Nextflow pipeline with test profile' | |
| run: | | |
| chmod +x bin/* | |
| nextflow run . -profile test,ci,docker | |
| - name: Push image to GitHub container registry | |
| if: startsWith(github.event.ref, 'refs/tags') | |
| uses: docker/build-push-action@v2 | |
| with: | |
| context: . | |
| file: containers/Dockerfile | |
| platforms: linux/amd64 | |
| push: true | |
| tags: ghcr.io/${{ github.repository }}:1.1.2, ghcr.io/${{ github.repository }}:latest |