Skip to content

sushmitaS16/bioinformatics_essentials

Repository files navigation

The repository is dedicated to providing simple solutions to the most common bioinformatics analysis requirements.

The scripts available :

  1. generateReverseComplement.py - to find the reverse complement of a DNA sequence
  2. identifyGenesofInterest.py - to find genes/transcripts present in a count matrix datafile in gene/transcript annotation file
  3. normalizeCountMatrix.py - to scale count matrix data (based on DESeq2's scaling algorithm)
  4. readGFFtoDataframe.py - to convert a GFF/GFF3 file into a csv file format

About

Scripts for some of the most common bioinformatic analyses

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages