Added test for custom pop output #499

Workflow file for this run

.github/workflows/maboss-macos.yml at c82b806

	name: MacOS

	on:
	push:
	pull_request:
	release:
	types: [created]

	jobs:
	maboss_macos:
	name: MaBoSS
	runs-on: macos-12
	env:
	CC: gcc-12
	CXX: g++-12
	INSTALL_PATH: /usr/local
	BUILD_PATH: /tmp/
	LIBXML_LIBDIR: /usr/local/opt/libxml2/lib/libxml2.2.dylib
	LIBXML_INCLUDEDIR: /usr/local/opt/libxml2/include/libxml2/
	MACOSX_DEPLOYMENT_TARGET: 12.0

	steps:
	- uses: actions/checkout@v4
	- name: Install dependencies
	run : \|
	brew install gcc flex bison cmake
	brew install libxml2 hdf5
	pip install numpy

	- name: Set cmake version variable
	run: \|
	echo "CMAKE_VERSION=$(cmake --version \| head -n 1)" >> $GITHUB_ENV

	- name: Cache compiled libSBML
	id: cache-libsbml-gcc
	uses: actions/cache@v4
	with:
	path: /tmp/libsbml-5.20.4
	key: ${{ runner.os }}-${{ env.CMAKE_VERSION }}.libSBML-5.20.4-g++12-namespace

	- name: Compiling libSBML
	if: steps.cache-libsbml-gcc.outputs.cache-hit != 'true'
	run: bash scripts/build_libsbml.sh

	- name: Install libSBML
	run: sudo bash scripts/install_libsbml.sh

	- name: Build MaBoSS
	run: \|
	cd engine/src
	make clean
	export CXXFLAGS="${CXXFLAGS} -I/usr/local/include -I/usr/local/include/libxml2"
	export LDFLAGS="${LDFLAGS} -L/usr/local/lib -lxml2"
	make CXX=g++-12 CC=gcc-12 install SBML_COMPAT=1
	make CXX=g++-12 CC=gcc-12 MAXNODES=128 install SBML_COMPAT=1

	- name: Test MaBoSS
	run: bash scripts/run_tests.sh

	maboss_llvm_macos:
	name: MaBoSS (clang)
	runs-on: macos-12
	env:
	CC: clang
	CXX: clang++
	INSTALL_PATH: /usr/local
	BUILD_PATH: /tmp/
	LIBXML_LIBDIR: /usr/local/opt/libxml2/lib/libxml2.dylib
	LIBXML_INCLUDEDIR: /usr/local/opt/libxml2/include/libxml2/
	MACOSX_DEPLOYMENT_TARGET: 12.0

	steps:
	- uses: actions/checkout@v4
	- name: Install dependencies
	run : \|
	brew install flex bison cmake hdf5 libxml2
	pip install numpy

	- name: Set cmake version variable
	run: \|
	echo "CMAKE_VERSION=$(cmake --version \| head -n 1)" >> $GITHUB_ENV

	- name: Cache compiled libSBML
	id: cache-libsbml-clang
	uses: actions/cache@v4
	with:
	path: /tmp/libsbml-5.20.4
	key: ${{ runner.os }}-${{ env.CMAKE_VERSION }}-libSBML-5.20.4-clang++-namespace

	- name: Compiling libSBML
	if: steps.cache-libsbml-clang.outputs.cache-hit != 'true'
	run: bash scripts/build_libsbml.sh

	- name: Install libSBML
	run: \|
	sudo bash scripts/install_libsbml.sh

	- name: Build MaBoSS
	run: \|
	cd engine/src
	make clean
	make CXX=g++ install SBML_COMPAT=1
	make CXX=g++ MAXNODES=128 install SBML_COMPAT=1

	- name: Test MaBoSS
	run: bash scripts/run_tests.sh

	maboss_binary_macos:
	name: MaBoSS MacOSX x86_64 binary
	runs-on: macos-12
	needs: [maboss_macos, maboss_llvm_macos]
	env:
	CC: clang
	CXX: clang++
	INSTALL_PATH: /usr/local
	BUILD_PATH: /tmp/
	LIBXML_LIBDIR: /usr/local/opt/libxml2/lib/libxml2.dylib
	LIBXML_INCLUDEDIR: /usr/local/opt/libxml2/include/libxml2/
	MACOSX_DEPLOYMENT_TARGET: 12.0

	steps:
	- uses: actions/checkout@v4
	- name: Install dependencies
	run : \|
	brew install flex bison cmake libxml2

	- name: Set cmake version variable
	run: \|
	echo "CMAKE_VERSION=$(cmake --version \| head -n 1)" >> $GITHUB_ENV

	- name: Cache compiled libSBML
	id: cache-libsbml-clang
	uses: actions/cache@v4
	with:
	path: /tmp/libsbml-5.20.4
	key: ${{ runner.os }}-${{ env.CMAKE_VERSION }}-libSBML-5.20.4-clang++-namespace

	- name: Compiling libSBML
	if: steps.cache-libsbml-clang.outputs.cache-hit != 'true'
	run: bash scripts/build_libsbml.sh

	- name: Install libSBML
	run: sudo bash scripts/install_libsbml.sh

	- name: Build binary
	run: \|
	rm -fr engine/pub/*
	cd engine/src
	make clean
	make install_static CC=clang CXX=clang++ SBML_COMPAT=1
	make install_static CC=clang CXX=clang++ MAXNODES=128 SBML_COMPAT=1
	make install_static CC=clang CXX=clang++ MAXNODES=256 SBML_COMPAT=1
	make install_static CC=clang CXX=clang++ MAXNODES=512 SBML_COMPAT=1
	make install_static CC=clang CXX=clang++ MAXNODES=1024 SBML_COMPAT=1
	cd ../pub
	zip MaBoSS-osx64.zip *

	- name: Caching produced project binaries
	uses: actions/cache@v4
	with:
	path: \|
	${{ github.workspace }}/engine/pub/MaBoSS-osx64.zip
	key: ${{ runner.os }}-macos-MaBoSS-${{ github.run_id }}

	- uses: actions/upload-artifact@v4
	if: github.event_name != 'release'
	with:
	name: MaBoSS-osx64
	path: /Users/runner/work/MaBoSS/MaBoSS/engine/pub/MaBoSS-osx64.zip

	- uses: actions/upload-release-asset@v1
	if: github.event_name == 'release'
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	with:
	upload_url: ${{ github.event.release.upload_url }}
	asset_name: MaBoSS-osx64.zip
	asset_path: /Users/runner/work/MaBoSS/MaBoSS/engine/pub/MaBoSS-osx64.zip
	asset_content_type: application/zip

	maboss_binary_macos_m1:
	name: MaBoSS MacOSX arm64 binary
	needs: [maboss_macos, maboss_llvm_macos]
	runs-on: macos-14
	env:
	CC: clang
	CXX: clang++
	INSTALL_PATH: /usr/local
	BUILD_PATH: /tmp/
	LIBXML_LIBDIR: /opt/homebrew/opt/libxml2/lib/libxml2.dylib
	LIBXML_INCLUDEDIR: /opt/homebrew/opt/libxml2/include/
	MACOSX_DEPLOYMENT_TARGET: 12.0

	steps:
	- uses: actions/checkout@v4
	- name: Install dependencies
	run : \|
	brew install flex bison cmake libxml2

	- name: Set cmake version variable
	run: \|
	echo "CMAKE_VERSION=$(cmake --version \| head -n 1)" >> $GITHUB_ENV

	- name: Cache compiled libSBML
	id: cache-libsbml-clang
	uses: actions/cache@v4
	with:
	path: /tmp/libsbml-5.20.4
	key: ${{ runner.os }}-m1-${{ env.CMAKE_VERSION }}-libSBML-5.20.4-clang++-namespace

	- name: Compiling libSBML
	if: steps.cache-libsbml-clang.outputs.cache-hit != 'true'
	run: bash scripts/build_libsbml.sh

	- name: Install libSBML
	run: sudo bash scripts/install_libsbml.sh

	- name: Build binary
	run: \|
	rm -fr engine/pub/*
	cd engine/src
	make clean
	make install_static CC=clang CXX=clang++ SBML_COMPAT=1
	make install_static CC=clang CXX=clang++ MAXNODES=128 SBML_COMPAT=1
	make install_static CC=clang CXX=clang++ MAXNODES=256 SBML_COMPAT=1
	make install_static CC=clang CXX=clang++ MAXNODES=512 SBML_COMPAT=1
	make install_static CC=clang CXX=clang++ MAXNODES=1024 SBML_COMPAT=1
	cd ../pub
	zip MaBoSS-osx-arm64.zip *

	- name: Caching produced project binaries
	uses: actions/cache@v4
	with:
	path: \|
	${{ github.workspace }}/engine/pub/MaBoSS-osx-arm64.zip
	key: ${{ runner.os }}-macosarm64-MaBoSS-${{ github.run_id }}

	- uses: actions/upload-artifact@v4
	if: github.event_name != 'release'
	with:
	name: MaBoSS-osx-arm64
	path: /Users/runner/work/MaBoSS/MaBoSS/engine/pub/MaBoSS-osx-arm64.zip

	- uses: actions/upload-release-asset@v1
	if: github.event_name == 'release'
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	with:
	upload_url: ${{ github.event.release.upload_url }}
	asset_name: MaBoSS-osx-arm64.zip
	asset_path: /Users/runner/work/MaBoSS/MaBoSS/engine/pub/MaBoSS-osx-arm64.zip
	asset_content_type: application/zip

	maboss_binary_macos_universal:
	name: MaBoSS MacOSX universal binary
	needs: [maboss_binary_macos, maboss_binary_macos_m1]
	runs-on: macos-12

	steps:
	- uses: actions/checkout@v4
	- name: Install dependencies
	run : \|
	brew install unzip

	- name: Caching produced project binaries
	uses: actions/cache@v4
	with:
	path: \|
	${{ github.workspace }}/engine/pub/MaBoSS-osx-arm64.zip
	key: ${{ runner.os }}-macosarm64-MaBoSS-${{ github.run_id }}

	- name: Caching produced project binaries
	uses: actions/cache@v4
	with:
	path: \|
	${{ github.workspace }}/engine/pub/MaBoSS-osx64.zip
	key: ${{ runner.os }}-macos-MaBoSS-${{ github.run_id }}

	- name: Create universal binaries
	run : \|
	cd engine/pub
	unzip MaBoSS-osx64.zip -d MaBoSS-osx64
	unzip MaBoSS-osx-arm64.zip -d MaBoSS-osx-arm64
	lipo -create -output MaBoSS MaBoSS-osx64/MaBoSS MaBoSS-osx-arm64/MaBoSS
	lipo -create -output MaBoSS_128n MaBoSS-osx64/MaBoSS_128n MaBoSS-osx-arm64/MaBoSS_128n
	lipo -create -output MaBoSS_256n MaBoSS-osx64/MaBoSS_256n MaBoSS-osx-arm64/MaBoSS_256n
	lipo -create -output MaBoSS_512n MaBoSS-osx64/MaBoSS_512n MaBoSS-osx-arm64/MaBoSS_512n
	lipo -create -output MaBoSS_1024n MaBoSS-osx64/MaBoSS_1024n MaBoSS-osx-arm64/MaBoSS_1024n
	lipo -create -output PopMaBoSS MaBoSS-osx64/PopMaBoSS MaBoSS-osx-arm64/PopMaBoSS
	lipo -create -output PopMaBoSS_128n MaBoSS-osx64/PopMaBoSS_128n MaBoSS-osx-arm64/PopMaBoSS_128n
	lipo -create -output PopMaBoSS_256n MaBoSS-osx64/PopMaBoSS_256n MaBoSS-osx-arm64/PopMaBoSS_256n
	lipo -create -output PopMaBoSS_512n MaBoSS-osx64/PopMaBoSS_512n MaBoSS-osx-arm64/PopMaBoSS_512n
	lipo -create -output PopMaBoSS_1024n MaBoSS-osx64/PopMaBoSS_1024n MaBoSS-osx-arm64/PopMaBoSS_1024n
	zip MaBoSS-osx-universal.zip MaBoSS MaBoSS_128n MaBoSS_256n MaBoSS_512n MaBoSS_1024n PopMaBoSS PopMaBoSS_128n PopMaBoSS_256n PopMaBoSS_512n PopMaBoSS_1024n


	- uses: actions/upload-artifact@v4
	if: github.event_name != 'release'
	with:
	name: MaBoSS-osx-universal
	path: /Users/runner/work/MaBoSS/MaBoSS/engine/pub/MaBoSS-osx-universal.zip

	- uses: actions/upload-release-asset@v1
	if: github.event_name == 'release'
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	with:
	upload_url: ${{ github.event.release.upload_url }}
	asset_name: MaBoSS-osx-universal.zip
	asset_path: /Users/runner/work/MaBoSS/MaBoSS/engine/pub/MaBoSS-osx-universal.zip
	asset_content_type: application/zip

	maboss_library_macos:
	name: Building MaBoSS osx library
	runs-on: macos-12
	needs: [maboss_macos, maboss_llvm_macos]

	steps:
	- uses: actions/checkout@v4
	- name: Install dependencies
	run : \|
	brew install flex bison

	- name: Build library
	run: \|
	rm -fr engine/pub/*
	cd engine/src
	make clean
	make install_lib CC=gcc-12 CXX=g++-12
	make install_lib MAXNODES=128 CC=gcc-12 CXX=g++-12
	make install_lib MAXNODES=256 CC=gcc-12 CXX=g++-12
	make install_lib MAXNODES=512 CC=gcc-12 CXX=g++-12
	make install_lib MAXNODES=1024 CC=gcc-12 CXX=g++-12
	make install_alib CC=gcc-12 CXX=g++-12
	make install_alib MAXNODES=128 CC=gcc-12 CXX=g++-12
	make install_alib MAXNODES=256 CC=gcc-12 CXX=g++-12
	make install_alib MAXNODES=512 CC=gcc-12 CXX=g++-12
	make install_alib MAXNODES=1024 CC=gcc-12 CXX=g++-12
	make clean
	cd ../../../
	tar -zcvf libMaBoSS-osx64.tar.gz MaBoSS/README.md MaBoSS/LICENSE MaBoSS/engine/src MaBoSS/engine/include MaBoSS/engine/lib

	- uses: actions/upload-artifact@v4
	if: github.event_name != 'release'
	with:
	name: libMaBoSS-osx64
	path: /Users/runner/work/MaBoSS/libMaBoSS-osx64.tar.gz

	- uses: actions/upload-release-asset@v1
	if: github.event_name == 'release'
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	with:
	upload_url: ${{ github.event.release.upload_url }}
	asset_name: libMaBoSS-osx64.tar.gz
	asset_path: /Users/runner/work/MaBoSS/libMaBoSS-osx64.tar.gz
	asset_content_type: application/gzip

	maboss_library_macos_m1:
	name: Building MaBoSS osx library for arm64
	runs-on: macos-14
	needs: [maboss_macos, maboss_llvm_macos]

	steps:
	- uses: actions/checkout@v4

	- name: Install dependencies
	run : \|
	brew install flex bison

	- name: Build library
	run: \|
	rm -fr engine/pub/*
	cd engine/src
	make clean
	make install_lib CC=gcc-12 CXX=g++-12
	make install_lib MAXNODES=128 CC=gcc-12 CXX=g++-12
	make install_lib MAXNODES=256 CC=gcc-12 CXX=g++-12
	make install_lib MAXNODES=512 CC=gcc-12 CXX=g++-12
	make install_lib MAXNODES=1024 CC=gcc-12 CXX=g++-12
	make install_alib CC=gcc-12 CXX=g++-12
	make install_alib MAXNODES=128 CC=gcc-12 CXX=g++-12
	make install_alib MAXNODES=256 CC=gcc-12 CXX=g++-12
	make install_alib MAXNODES=512 CC=gcc-12 CXX=g++-12
	make install_alib MAXNODES=1024 CC=gcc-12 CXX=g++-12
	make clean
	cd ../../../
	tar -zcvf libMaBoSS-macos-arm64.tar.gz MaBoSS/README.md MaBoSS/LICENSE MaBoSS/engine/src MaBoSS/engine/include MaBoSS/engine/lib

	- uses: actions/upload-artifact@v4
	if: github.event_name != 'release'
	with:
	name: libMaBoSS-macos-arm64
	path: /Users/runner/work/MaBoSS/libMaBoSS-macos-arm64.tar.gz

	- uses: actions/upload-release-asset@v1
	if: github.event_name == 'release'
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	with:
	upload_url: ${{ github.event.release.upload_url }}
	asset_name: libMaBoSS-macos-arm64.tar.gz
	asset_path: /Users/runner/work/MaBoSS/libMaBoSS-macos-arm64.tar.gz
	asset_content_type: application/gzip

	maboss_library_sbml_macos:
	name: Building MaBoSS osx library with libSBML
	runs-on: macos-12
	needs: [maboss_macos, maboss_llvm_macos]
	env:
	CC: gcc-12
	CXX: g++-12
	INSTALL_PATH: /usr/local/
	BUILD_PATH: /tmp/
	LIBXML_LIBDIR: /usr/local/opt/libxml2/lib/libxml2.dylib
	LIBXML_INCLUDEDIR: /usr/local/opt/libxml2/include/libxml2
	MACOSX_DEPLOYMENT_TARGET: 12.0

	steps:
	- uses: actions/checkout@v4
	- name: Install dependencies
	run : \|
	brew install flex bison cmake libxml2

	- name: Set cmake version variable
	run: \|
	echo "CMAKE_VERSION=$(cmake --version \| head -n 1)" >> $GITHUB_ENV

	- name: Cache compiled libSBML
	id: cache-libsbml-gcc12
	uses: actions/cache@v4
	with:
	path: /tmp/libsbml-5.20.4
	key: ${{ runner.os }}-${{ env.CMAKE_VERSION }}-libSBML-5.20.4-g++12-namespace

	- name: Compiling libSBML
	if: steps.cache-libsbml-gcc11.outputs.cache-hit != 'true'
	run: bash scripts/build_libsbml.sh

	- name: Install libSBML
	run: sudo bash scripts/install_libsbml.sh

	- name: Build library
	run: \|
	export CXXFLAGS="${CXXFLAGS} -I/usr/local/include -I/usr/local/include/libxml2"
	export LDFLAGS="${LDFLAGS} -L/usr/local/lib -lxml2"
	rm -fr engine/pub/*
	cd engine/src
	make clean
	make install CC=gcc-12 CXX=g++-12
	make install_lib SBML_COMPAT=1 CC=gcc-12 CXX=g++-12
	make install_lib SBML_COMPAT=1 CC=gcc-12 MAXNODES=128 CXX=g++-12
	make install_lib SBML_COMPAT=1 CC=gcc-12 MAXNODES=256 CXX=g++-12
	make install_lib SBML_COMPAT=1 CC=gcc-12 MAXNODES=512 CXX=g++-12
	make install_lib SBML_COMPAT=1 CC=gcc-12 MAXNODES=1024 CXX=g++-12
	make install_alib SBML_COMPAT=1 CC=gcc-12 CXX=g++-12
	make install_alib SBML_COMPAT=1 CC=gcc-12 MAXNODES=128 CXX=g++-12
	make install_alib SBML_COMPAT=1 CC=gcc-12 MAXNODES=256 CXX=g++-12
	make install_alib SBML_COMPAT=1 CC=gcc-12 MAXNODES=512 CXX=g++-12
	make install_alib SBML_COMPAT=1 CC=gcc-12 MAXNODES=1024 CXX=g++-12
	make clean
	cd ../../../
	tar -zcvf libMaBoSS-sbml-osx64.tar.gz MaBoSS/README.md MaBoSS/LICENSE MaBoSS/engine/src MaBoSS/engine/include MaBoSS/engine/lib

	- uses: actions/upload-artifact@v4
	if: github.event_name != 'release'
	with:
	name: libMaBoSS-sbml-osx64
	path: /Users/runner/work/MaBoSS/libMaBoSS-sbml-osx64.tar.gz

	- uses: actions/upload-release-asset@v1
	if: github.event_name == 'release'
	env:
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
	with:
	upload_url: ${{ github.event.release.upload_url }}
	asset_name: libMaBoSS-sbml-osx64.tar.gz
	asset_path: /Users/runner/work/MaBoSS/libMaBoSS-sbml-osx64.tar.gz
	asset_content_type: application/gzip



	conda_maboss_macosx:
	name: Build Conda MaBoSS package
	needs: [maboss_macos, maboss_llvm_macos]
	strategy:
	fail-fast: false
	matrix:
	repo: [
	{id: 0, name: "defaults"},
	{id: 1, name: "conda-forge"}
	]
	runs-on: macos-12
	defaults:
	run:
	shell: sh -l {0}

	steps:
	- uses: actions/checkout@v4
	- uses: conda-incubator/setup-miniconda@v3
	with:
	auto-update-conda: true
	channels: ${{ matrix.repo.name }}
	python-version: 3.12
	use-mamba: true

	- name: Installing conda-build
	run: \|
	conda install conda-build conda-verify anaconda-client

	- name: Installing MacOSX SDK
	run: \|
	wget https://github.com/phracker/MacOSX-SDKs/releases/download/11.3/MacOSX10.13.sdk.tar.xz
	sudo tar xf MacOSX10.13.sdk.tar.xz -C /opt
	echo "conda_build:" > ~/.condarc
	echo " config_file: ~/.conda/conda_build_config.yaml" >> ~/.condarc
	echo "CONDA_BUILD_SYSROOT:" > ~/.conda/conda_build_config.yaml
	echo " - /opt/MacOSX10.13.sdk # [osx]" >> ~/.conda/conda_build_config.yaml

	- name: Build MaBoSS Anaconda package
	run: \|
	CUSTOM_BUILD_NUMBER=${{ matrix.repo.id }} conda build -c ${{ matrix.repo.name }} -c colomoto conda/maboss

	- name: Upload MaBoSS to Anaconda cloud on vincent-noel
	run: \|
	anaconda -t ${{ secrets.ANACONDA_TOKEN }} upload -u vincent-noel /usr/local/miniconda/envs/test/conda-bld/osx-64/*.tar.bz2 --force;


	- name: Upload MaBoSS to Anaconda cloud on colomoto
	if: github.repository == 'sysbio-curie/MaBoSS' && github.event_name == 'release'
	run: \|
	anaconda -t ${{ secrets.ANACONDA_TOKEN }} upload -u colomoto /usr/local/miniconda/envs/test/conda-bld/osx-64/*.tar.bz2 --force;

	conda_maboss_macosx_m1:
	name: Build Conda MaBoSS package for arm64
	needs: [maboss_macos, maboss_llvm_macos]
	strategy:
	fail-fast: false
	matrix:
	repo: [
	{id: 0, name: "defaults", path: "/Users/runner/miniconda3"},
	{id: 1, name: "conda-forge", path: "/Users/runner/miniconda3"}
	]
	runs-on: macos-14
	defaults:
	run:
	shell: sh -l {0}

	steps:
	- uses: actions/checkout@v4
	- uses: conda-incubator/setup-miniconda@v3
	with:
	auto-update-conda: true
	channels: ${{ matrix.repo.name }}
	python-version: 3.12
	use-mamba: true

	- name: Installing conda-build
	run: \|
	conda install conda-build conda-verify anaconda-client

	- name: Installing MacOSX SDK
	run: \|
	wget https://github.com/phracker/MacOSX-SDKs/releases/download/11.3/MacOSX11.0.sdk.tar.xz
	sudo tar xf MacOSX11.0.sdk.tar.xz -C /opt
	echo "conda_build:" > ~/.condarc
	echo " config_file: ~/.conda/conda_build_config.yaml" >> ~/.condarc
	echo "CONDA_BUILD_SYSROOT:" > ~/.conda/conda_build_config.yaml
	echo " - /opt/MacOSX11.0.sdk # [osx]" >> ~/.conda/conda_build_config.yaml

	- name: Build MaBoSS Anaconda package
	run: \|
	CUSTOM_BUILD_NUMBER=${{ matrix.repo.id }} conda build -c ${{ matrix.repo.name }} -c colomoto conda/maboss

	- name: Upload MaBoSS to Anaconda cloud on vincent-noel
	run: \|
	anaconda -t ${{ secrets.ANACONDA_TOKEN }} upload -u vincent-noel ${{ matrix.repo.path }}/envs/test/conda-bld/osx-arm64/*.tar.bz2 --force;


	- name: Upload MaBoSS to Anaconda cloud on colomoto
	if: github.repository == 'sysbio-curie/MaBoSS' && github.event_name == 'release'
	run: \|
	anaconda -t ${{ secrets.ANACONDA_TOKEN }} upload -u colomoto ${{ matrix.repo.path }}/envs/test/conda-bld/osx-arm64/*.tar.bz2 --force;

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Added test for custom pop output #499

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Added test for custom pop output #499

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