Exporting ld_library_path for clang test #520
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| name: Windows | |
| on: | |
| push: | |
| pull_request: | |
| release: | |
| types: [created] | |
| jobs: | |
| maboss_windows: | |
| name: MaBoSS Windows | |
| runs-on: windows-latest | |
| defaults: | |
| run: | |
| shell: msys2 {0} | |
| env: | |
| CC: gcc | |
| CXX: g++ | |
| INSTALL_PATH: /mingw64/ | |
| BUILD_PATH: /tmp/ | |
| LIBXML_LIBDIR: /mingw64/lib/libxml2.dll.a | |
| LIBXML_INCLUDEDIR: /mingw64/include/libxml2/ | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: msys2/setup-msys2@v2 | |
| with: | |
| update: true | |
| install: flex bison make | |
| mingw-w64-x86_64-toolchain mingw-w64-x86_64-cmake mingw-w64-x86_64-binutils | |
| mingw-w64-x86_64-gcc mingw-w64-x86_64-headers-git mingw-w64-x86_64-gcc-libs | |
| mingw-w64-x86_64-libwinpthread-git mingw-w64-x86_64-winpthreads-git mingw-w64-x86_64-bzip2 | |
| mingw-w64-x86_64-lapack mingw-w64-x86_64-openblas mingw-w64-x86_64-hdf5 | |
| mingw-w64-x86_64-python-pip mingw-w64-x86_64-python-numpy mingw-w64-x86_64-libxml2 | |
| mingw-w64-x86_64-diffutils | |
| - name: Cache compiled libSBML | |
| id: cache-libsbml-gcc | |
| uses: actions/cache@v4 | |
| with: | |
| path: D:/a/_temp/msys64/tmp/libsbml-5.20.4 | |
| key: ${{ runner.os }}-libSBML-5.20.4-namespace | |
| - name: Compiling libSBML | |
| if: steps.cache-libsbml-gcc.outputs.cache-hit != 'true' | |
| run: | | |
| bash scripts/build_libsbml.sh | |
| - name: Install libSBML | |
| run: | | |
| bash scripts/install_libsbml.sh | |
| - name: Build MaBoSS | |
| run: | | |
| cd engine/src | |
| make MAXNODES=128 SBML_COMPAT=1 maboss popmaboss | |
| make SBML_COMPAT=1 maboss popmaboss | |
| - name: Test MaBoSS | |
| run: bash scripts/run_tests.sh | |
| maboss_binary_windows: | |
| runs-on: windows-latest | |
| name: Building MaBoSS Windows 64bits binary | |
| needs: maboss_windows | |
| defaults: | |
| run: | |
| shell: msys2 {0} | |
| env: | |
| CC: gcc | |
| CXX: g++ | |
| INSTALL_PATH: /mingw64/ | |
| BUILD_PATH: /tmp/ | |
| LIBXML_LIBDIR: /mingw64/lib/libxml2.dll.a | |
| LIBXML_INCLUDEDIR: /mingw64/include/libxml2/ | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: msys2/setup-msys2@v2 | |
| with: | |
| update: true | |
| install: flex bison make zip | |
| mingw-w64-x86_64-toolchain mingw-w64-x86_64-cmake mingw-w64-x86_64-binutils | |
| mingw-w64-x86_64-gcc mingw-w64-x86_64-headers-git mingw-w64-x86_64-gcc-libs | |
| mingw-w64-x86_64-libwinpthread-git mingw-w64-x86_64-winpthreads-git mingw-w64-x86_64-bzip2 | |
| mingw-w64-x86_64-lapack mingw-w64-x86_64-openblas mingw-w64-x86_64-libxml2 | |
| - name: Cache compiled libSBML | |
| id: cache-libsbml-gcc | |
| uses: actions/cache@v4 | |
| with: | |
| path: D:/a/_temp/msys64/tmp/libsbml-5.20.4 | |
| key: ${{ runner.os }}-libSBML-5.20.4-namespace | |
| - name: Compiling libSBML | |
| if: steps.cache-libsbml-gcc.outputs.cache-hit != 'true' | |
| run: | | |
| bash scripts/build_libsbml.sh | |
| - name: Install libSBML | |
| run: | | |
| bash scripts/install_libsbml.sh | |
| - name: Build binary | |
| run: | | |
| rm -fr engine/pub/* | |
| cd engine/src | |
| make clean | |
| make install_static SBML_COMPAT=1 | |
| make install_static MAXNODES=128 SBML_COMPAT=1 | |
| make install_static MAXNODES=256 SBML_COMPAT=1 | |
| make install_static MAXNODES=512 SBML_COMPAT=1 | |
| make install_static MAXNODES=1024 SBML_COMPAT=1 | |
| cd ../pub | |
| zip MaBoSS-win64.zip * | |
| - uses: actions/upload-artifact@v4 | |
| if: github.event_name != 'release' | |
| with: | |
| name: MaBoSS-win64 | |
| path: D:\a\MaBoSS/MaBoSS/engine/pub/MaBoSS-win64.zip | |
| - uses: actions/upload-release-asset@v1 | |
| if: github.event_name == 'release' | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ github.event.release.upload_url }} | |
| asset_name: MaBoSS-win64.zip | |
| asset_path: D:\a\MaBoSS/MaBoSS/engine/pub/MaBoSS-win64.zip | |
| asset_content_type: application/zip | |
| maboss_library_windows: | |
| runs-on: windows-latest | |
| name: Building MaBoSS Windows 64bits library | |
| needs: maboss_windows | |
| defaults: | |
| run: | |
| shell: msys2 {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: msys2/setup-msys2@v2 | |
| with: | |
| update: true | |
| install: flex bison make | |
| mingw-w64-x86_64-toolchain mingw-w64-x86_64-cmake mingw-w64-x86_64-binutils | |
| mingw-w64-x86_64-gcc mingw-w64-x86_64-headers-git mingw-w64-x86_64-gcc-libs | |
| mingw-w64-x86_64-libwinpthread-git mingw-w64-x86_64-winpthreads-git | |
| - name: Build library | |
| run: | | |
| rm -fr engine/pub/* | |
| cd engine/src | |
| make clean | |
| make install_lib | |
| make install_lib MAXNODES=128 | |
| make install_lib MAXNODES=256 | |
| make install_lib MAXNODES=512 | |
| make install_lib MAXNODES=1024 | |
| make install_alib | |
| make install_alib MAXNODES=128 | |
| make install_alib MAXNODES=256 | |
| make install_alib MAXNODES=512 | |
| make install_alib MAXNODES=1024 | |
| make clean | |
| cd ../../../ | |
| tar -zcvf libMaBoSS-win64.tar.gz MaBoSS/README.md MaBoSS/LICENSE MaBoSS/engine/src MaBoSS/engine/include MaBoSS/engine/lib | |
| - uses: actions/upload-artifact@v4 | |
| if: github.event_name != 'release' | |
| with: | |
| name: libMaBoSS-win64 | |
| path: D:\a\MaBoSS/libMaBoSS-win64.tar.gz | |
| - uses: actions/upload-release-asset@v1 | |
| if: github.event_name == 'release' | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ github.event.release.upload_url }} | |
| asset_name: libMaBoSS-win64.tar.gz | |
| asset_path: D:\a\MaBoSS/libMaBoSS-win64.tar.gz | |
| asset_content_type: application/gzip | |
| maboss_sbml_library_windows: | |
| runs-on: windows-latest | |
| name: Building MaBoSS Windows 64bits library with libSBML | |
| needs: maboss_windows | |
| defaults: | |
| run: | |
| shell: msys2 {0} | |
| env: | |
| CC: gcc | |
| CXX: g++ | |
| INSTALL_PATH: /mingw64/ | |
| BUILD_PATH: /tmp/ | |
| LIBXML_LIBDIR: /mingw64/lib/libxml2.dll.a | |
| LIBXML_INCLUDEDIR: /mingw64/include/libxml2/ | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: msys2/setup-msys2@v2 | |
| with: | |
| update: true | |
| install: flex bison make | |
| mingw-w64-x86_64-toolchain mingw-w64-x86_64-cmake mingw-w64-x86_64-binutils | |
| mingw-w64-x86_64-gcc mingw-w64-x86_64-headers-git mingw-w64-x86_64-gcc-libs | |
| mingw-w64-x86_64-libwinpthread-git mingw-w64-x86_64-winpthreads-git mingw-w64-x86_64-bzip2 | |
| mingw-w64-x86_64-lapack mingw-w64-x86_64-openblas mingw-w64-x86_64-libxml2 | |
| - name: Cache compiled libSBML | |
| id: cache-libsbml-gcc | |
| uses: actions/cache@v4 | |
| with: | |
| path: D:/a/_temp/msys64/tmp/libsbml-5.20.4 | |
| key: ${{ runner.os }}-libSBML-5.20.4-namespace | |
| - name: Compiling libSBML | |
| if: steps.cache-libsbml-gcc.outputs.cache-hit != 'true' | |
| run: | | |
| bash scripts/build_libsbml.sh | |
| - name: Install libSBML | |
| run: | | |
| bash scripts/install_libsbml.sh | |
| - name: Build library | |
| run: | | |
| rm -fr engine/pub/* | |
| cd engine/src | |
| make clean | |
| make install_lib SBML_COMPAT=1 | |
| make install_lib MAXNODES=128 SBML_COMPAT=1 | |
| make install_lib MAXNODES=256 SBML_COMPAT=1 | |
| make install_lib MAXNODES=512 SBML_COMPAT=1 | |
| make install_lib MAXNODES=1024 SBML_COMPAT=1 | |
| make install_alib SBML_COMPAT=1 | |
| make install_alib MAXNODES=128 SBML_COMPAT=1 | |
| make install_alib MAXNODES=256 SBML_COMPAT=1 | |
| make install_alib MAXNODES=512 SBML_COMPAT=1 | |
| make install_alib MAXNODES=1024 SBML_COMPAT=1 | |
| make clean | |
| cd ../../../ | |
| tar -zcvf libMaBoSS-sbml-win64.tar.gz MaBoSS/README.md MaBoSS/LICENSE MaBoSS/engine/src MaBoSS/engine/include MaBoSS/engine/lib | |
| - uses: actions/upload-artifact@v4 | |
| if: github.event_name != 'release' | |
| with: | |
| name: libMaBoSS-sbml-win64 | |
| path: D:\a\MaBoSS/libMaBoSS-sbml-win64.tar.gz | |
| - uses: actions/upload-release-asset@v1 | |
| if: github.event_name == 'release' | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| upload_url: ${{ github.event.release.upload_url }} | |
| asset_name: libMaBoSS-sbml-win64.tar.gz | |
| asset_path: D:\a\MaBoSS/libMaBoSS-sbml-win64.tar.gz | |
| asset_content_type: application/gzip | |