Gamma ray spectrum from packet dataframe #2601

Knights-Templars · 2024-04-24T20:19:11Z

📝 Description

Type: 🚀 feature

This PR aims to connect the required input for the gammaraypacketsource from a pandas data frame containing the isotope data. This is aimed only for the escaping packets.

📌 Resources

How did you test these changes?

Testing to be implemented

☑️ Checklist

I requested two reviewers for this pull request.

tardis-bot · 2024-06-21T15:58:38Z

*beep* *bop*
Hi human,
I ran benchmarks as you asked comparing master (e88a31a) and the latest commit (4c027f5).
Here are the logs produced by ASV.
Results can also be downloaded as artifacts here.

Significantly changed benchmarks:

All benchmarks:

All benchmarks:

| Change   | Before [d0d7a75e]    | After [d0d7a75e]    |   Ratio | Benchmark (Parameter)                                                                                                                                                                                                 |
|----------|----------------------|---------------------|---------|-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|
|          | 41.2±0.03s           | 41.2±0.03s          |       1 | run_tardis.BenchmarkRunTardis.time_run_tardis                                                                                                                                                                         |
|          | 26.9±3μs             | 26.9±3μs            |       1 | transport_geometry_calculate_distances.BenchmarkTransportGeometryCalculateDistances.time_calculate_distance_boundary                                                                                                  |
|          | 46.5±10μs            | 46.5±10μs           |       1 | transport_geometry_calculate_distances.BenchmarkTransportGeometryCalculateDistances.time_calculate_distance_line({'packet': {'nu_line': 0.1, 'is_last_line': True}, 'enable_full_relativity': True})                  |
|          | 44.0±5μs             | 44.0±5μs            |       1 | transport_geometry_calculate_distances.BenchmarkTransportGeometryCalculateDistances.time_calculate_distance_line({'packet': {'nu_line': 0.2, 'is_last_line': False}, 'enable_full_relativity': True})                 |
|          | 9.07±0s              | 9.07±0s             |       1 | transport_montecarlo_interaction.BenchmarkMontecarloMontecarloNumbaInteraction.time_line_emission({'mu': -0.6975116557422458, 'emission_line_id': 2000, 'energy': 0.8803098648913266})                                |
|          | 9.06±0.02s           | 9.06±0.02s          |       1 | transport_montecarlo_interaction.BenchmarkMontecarloMontecarloNumbaInteraction.time_line_emission({'mu': -0.7115661419975774, 'emission_line_id': 0, 'energy': 0.8800385929341252})                                   |
|          | 9.16±0.01s           | 9.16±0.01s          |       1 | transport_montecarlo_interaction.BenchmarkMontecarloMontecarloNumbaInteraction.time_line_emission({'mu': 0.8599443103322428, 'emission_line_id': 1000, 'energy': 0.9114437898710559})                                 |
|          | 9.74±0s              | 9.74±0s             |       1 | transport_montecarlo_interaction.BenchmarkMontecarloMontecarloNumbaInteraction.time_line_scatter(<LineInteractionType.DOWNBRANCH: 1>)                                                                                 |
|          | 9.82±0.02s           | 9.82±0.02s          |       1 | transport_montecarlo_interaction.BenchmarkMontecarloMontecarloNumbaInteraction.time_line_scatter(<LineInteractionType.MACROATOM: 2>)                                                                                  |
|          | 9.93±0.06s           | 9.93±0.06s          |       1 | transport_montecarlo_interaction.BenchmarkMontecarloMontecarloNumbaInteraction.time_line_scatter(<LineInteractionType.SCATTER: 0>)                                                                                    |
|          | 3.57±0.02s           | 3.57±0.02s          |       1 | transport_montecarlo_interaction.BenchmarkMontecarloMontecarloNumbaInteraction.time_thomson_scatter                                                                                                                   |
|          | 4.35±0.03s           | 4.35±0.03s          |       1 | transport_montecarlo_main_loop.BenchmarkTransportMontecarloMainLoop.time_montecarlo_main_loop                                                                                                                         |
|          | 2.14±0m              | 2.14±0m             |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_FormalIntegrator_functions                                                                                    |
|          | 1.58±0.7μs           | 1.58±0.7μs          |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_p_values(100)                                                                                       |
|          | 2.42±0.7μs           | 2.42±0.7μs          |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_p_values(1000)                                                                                      |
|          | 9.90±0.7μs           | 9.90±0.7μs          |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_p_values(10000)                                                                                     |
|          | 731±1ms              | 731±1ms             |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_z(0.0, array([0. , 0.5, 1. ]))                                                                      |
|          | 742±2ms              | 742±2ms             |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_z(0.0, array([1. , 1.5, 2. ]))                                                                      |
|          | 763±3ms              | 763±3ms             |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_z(0.5, array([0. , 0.5, 1. ]))                                                                      |
|          | 739±6ms              | 739±6ms             |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_z(0.5, array([1. , 1.5, 2. ]))                                                                      |
|          | 753±4ms              | 753±4ms             |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_z(1.0, array([0. , 0.5, 1. ]))                                                                      |
|          | 763±10ms             | 763±10ms            |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_calculate_z(1.0, array([1. , 1.5, 2. ]))                                                                      |
|          | 696±200ns            | 696±200ns           |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_intensity_black_body({'nu': 0, 'temperature': 1})                                                             |
|          | 696±200ns            | 696±200ns           |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_intensity_black_body({'nu': 1, 'temperature': 1})                                                             |
|          | 701±200ns            | 701±200ns           |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_intensity_black_body({'nu': 100000000000000.0, 'temperature': 10000.0})                                       |
|          | 3.63±1μs             | 3.63±1μs            |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_trapezoid_integration(100.0)                                                                                  |
|          | 9.17±1μs             | 9.17±1μs            |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_trapezoid_integration(1000.0)                                                                                 |
|          | 64.9±1μs             | 64.9±1μs            |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_trapezoid_integration(10000.0)                                                                                |
|          | 657±9μs              | 657±9μs             |       1 | transport_montecarlo_numba_formal_integral_p.BenchmarkMontecarloMontecarloNumbaNumbaFormalIntegral.time_trapezoid_integration(100000.0)                                                                               |
|          | 2.19±0.01s           | 2.19±0.01s          |       1 | transport_montecarlo_numba_interface.BenchmarkMontecarloMontecarloNumbaNumbaInterface.time_opacity_state_initialize('downbranch')                                                                                     |
|          | 2.18±0.02s           | 2.18±0.02s          |       1 | transport_montecarlo_numba_interface.BenchmarkMontecarloMontecarloNumbaNumbaInterface.time_opacity_state_initialize('macroatom')                                                                                      |
|          | 2.16±0.01s           | 2.16±0.01s          |       1 | transport_montecarlo_numba_interface.BenchmarkMontecarloMontecarloNumbaNumbaInterface.time_opacity_state_initialize('scatter')                                                                                        |
|          | 801±200ns            | 801±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(100000.0, 255.5)                                                                                          |
|          | 621±200ns            | 621±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(100000.0, 511.0)                                                                                          |
|          | 687±200ns            | 687±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(100000.0, 5110000000.0)                                                                                   |
|          | 676±200ns            | 676±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(100000000000.0, 255.5)                                                                                    |
|          | 641±200ns            | 641±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(100000000000.0, 511.0)                                                                                    |
|          | 657±200ns            | 657±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(100000000000.0, 5110000000.0)                                                                             |
|          | 637±200ns            | 637±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(1000000000000000.0, 255.5)                                                                                |
|          | 646±200ns            | 646±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(1000000000000000.0, 511.0)                                                                                |
|          | 591±200ns            | 591±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_compton_opacity_calculation(1000000000000000.0, 5110000000.0)                                                                         |
|          | 706±200ns            | 706±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 1200, 0.0)                                                                                |
|          | 706±200ns            | 706±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 1200, 0.25)                                                                               |
|          | 641±200ns            | 641±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 1200, 0.5)                                                                                |
|          | 707±200ns            | 707±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 1200, 1.0)                                                                                |
|          | 671±200ns            | 671±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 1500, 0.0)                                                                                |
|          | 642±200ns            | 642±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 1500, 0.25)                                                                               |
|          | 691±200ns            | 691±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 1500, 0.5)                                                                                |
|          | 697±200ns            | 697±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 1500, 1.0)                                                                                |
|          | 666±200ns            | 666±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 511.0, 0.0)                                                                               |
|          | 656±200ns            | 656±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 511.0, 0.25)                                                                              |
|          | 671±200ns            | 671±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 511.0, 0.5)                                                                               |
|          | 706±200ns            | 706±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 511.0, 1.0)                                                                               |
|          | 686±200ns            | 686±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 5110000000.0, 0.0)                                                                        |
|          | 681±200ns            | 681±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 5110000000.0, 0.25)                                                                       |
|          | 666±200ns            | 666±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 5110000000.0, 0.5)                                                                        |
|          | 621±200ns            | 621±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (0), 5110000000.0, 1.0)                                                                        |
|          | 731±200ns            | 731±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 1200, 0.0)                                                                                |
|          | 721±200ns            | 721±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 1200, 0.25)                                                                               |
|          | 691±200ns            | 691±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 1200, 0.5)                                                                                |
|          | 701±400ns            | 701±400ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 1200, 1.0)                                                                                |
|          | 681±200ns            | 681±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 1500, 0.0)                                                                                |
|          | 767±200ns            | 767±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 1500, 0.25)                                                                               |
|          | 666±200ns            | 666±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 1500, 0.5)                                                                                |
|          | 736±300ns            | 736±300ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 1500, 1.0)                                                                                |
|          | 717±200ns            | 717±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 511.0, 0.0)                                                                               |
|          | 661±200ns            | 661±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 511.0, 0.25)                                                                              |
|          | 686±200ns            | 686±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 511.0, 0.5)                                                                               |
|          | 656±200ns            | 656±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 511.0, 1.0)                                                                               |
|          | 636±200ns            | 636±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 5110000000.0, 0.0)                                                                        |
|          | 636±200ns            | 636±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 5110000000.0, 0.25)                                                                       |
|          | 641±200ns            | 641±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 5110000000.0, 0.5)                                                                        |
|          | 682±200ns            | 682±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(0.01 (1), 5110000000.0, 1.0)                                                                        |
|          | 706±200ns            | 706±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 1200, 0.0)                                                                                     |
|          | 691±200ns            | 691±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 1200, 0.25)                                                                                    |
|          | 706±200ns            | 706±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 1200, 0.5)                                                                                     |
|          | 752±200ns            | 752±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 1200, 1.0)                                                                                     |
|          | 686±200ns            | 686±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 1500, 0.0)                                                                                     |
|          | 671±200ns            | 671±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 1500, 0.25)                                                                                    |
|          | 721±200ns            | 721±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 1500, 0.5)                                                                                     |
|          | 656±200ns            | 656±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 1500, 1.0)                                                                                     |
|          | 616±200ns            | 616±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 511.0, 0.0)                                                                                    |
|          | 677±200ns            | 677±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 511.0, 0.25)                                                                                   |
|          | 666±200ns            | 666±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 511.0, 0.5)                                                                                    |
|          | 646±200ns            | 646±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 511.0, 1.0)                                                                                    |
|          | 831±500ns            | 831±500ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 5110000000.0, 0.0)                                                                             |
|          | 692±200ns            | 692±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 5110000000.0, 0.25)                                                                            |
|          | 661±200ns            | 661±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 5110000000.0, 0.5)                                                                             |
|          | 637±200ns            | 637±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(1.0, 5110000000.0, 1.0)                                                                             |
|          | 672±200ns            | 672±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 1200, 0.0)                                                                                |
|          | 716±200ns            | 716±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 1200, 0.25)                                                                               |
|          | 676±200ns            | 676±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 1200, 0.5)                                                                                |
|          | 626±200ns            | 626±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 1200, 1.0)                                                                                |
|          | 686±200ns            | 686±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 1500, 0.0)                                                                                |
|          | 711±200ns            | 711±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 1500, 0.25)                                                                               |
|          | 681±200ns            | 681±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 1500, 0.5)                                                                                |
|          | 691±200ns            | 691±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 1500, 1.0)                                                                                |
|          | 676±200ns            | 676±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 511.0, 0.0)                                                                               |
|          | 696±200ns            | 696±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 511.0, 0.25)                                                                              |
|          | 641±200ns            | 641±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 511.0, 0.5)                                                                               |
|          | 646±200ns            | 646±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 511.0, 1.0)                                                                               |
|          | 656±300ns            | 656±300ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 5110000000.0, 0.0)                                                                        |
|          | 681±200ns            | 681±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 5110000000.0, 0.25)                                                                       |
|          | 657±200ns            | 657±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 5110000000.0, 0.5)                                                                        |
|          | 666±200ns            | 666±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_pair_creation_opacity_calculation(100000.0, 5110000000.0, 1.0)                                                                        |
|          | 672±200ns            | 672±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 255.5 (0), 0.0)                                                                         |
|          | 647±200ns            | 647±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 255.5 (0), 0.25)                                                                        |
|          | 696±200ns            | 696±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 255.5 (0), 0.5)                                                                         |
|          | 737±200ns            | 737±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 255.5 (0), 1.0)                                                                         |
|          | 726±200ns            | 726±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 255.5 (1), 0.0)                                                                         |
|          | 681±200ns            | 681±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 255.5 (1), 0.25)                                                                        |
|          | 716±200ns            | 716±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 255.5 (1), 0.5)                                                                         |
|          | 716±200ns            | 716±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 255.5 (1), 1.0)                                                                         |
|          | 696±200ns            | 696±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 511.0, 0.0)                                                                             |
|          | 701±200ns            | 701±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 511.0, 0.25)                                                                            |
|          | 852±500ns            | 852±500ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 511.0, 0.5)                                                                             |
|          | 667±200ns            | 667±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 511.0, 1.0)                                                                             |
|          | 666±200ns            | 666±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 5110000000.0, 0.0)                                                                      |
|          | 712±200ns            | 712±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 5110000000.0, 0.25)                                                                     |
|          | 686±200ns            | 686±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 5110000000.0, 0.5)                                                                      |
|          | 737±200ns            | 737±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (0), 5110000000.0, 1.0)                                                                      |
|          | 671±200ns            | 671±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 255.5 (0), 0.0)                                                                         |
|          | 711±200ns            | 711±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 255.5 (0), 0.25)                                                                        |
|          | 676±200ns            | 676±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 255.5 (0), 0.5)                                                                         |
|          | 706±200ns            | 706±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 255.5 (0), 1.0)                                                                         |
|          | 656±200ns            | 656±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 255.5 (1), 0.0)                                                                         |
|          | 657±200ns            | 657±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 255.5 (1), 0.25)                                                                        |
|          | 721±200ns            | 721±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 255.5 (1), 0.5)                                                                         |
|          | 681±200ns            | 681±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 255.5 (1), 1.0)                                                                         |
|          | 686±200ns            | 686±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 511.0, 0.0)                                                                             |
|          | 686±200ns            | 686±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 511.0, 0.25)                                                                            |
|          | 1.15±0.5μs           | 1.15±0.5μs          |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 511.0, 0.5)                                                                             |
|          | 696±200ns            | 696±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 511.0, 1.0)                                                                             |
|          | 676±200ns            | 676±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 5110000000.0, 0.0)                                                                      |
|          | 717±200ns            | 717±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 5110000000.0, 0.25)                                                                     |
|          | 676±200ns            | 676±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 5110000000.0, 0.5)                                                                      |
|          | 646±200ns            | 646±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(0.01 (1), 5110000000.0, 1.0)                                                                      |
|          | 761±200ns            | 761±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 255.5 (0), 0.0)                                                                              |
|          | 721±200ns            | 721±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 255.5 (0), 0.25)                                                                             |
|          | 687±200ns            | 687±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 255.5 (0), 0.5)                                                                              |
|          | 701±200ns            | 701±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 255.5 (0), 1.0)                                                                              |
|          | 707±200ns            | 707±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 255.5 (1), 0.0)                                                                              |
|          | 757±200ns            | 757±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 255.5 (1), 0.25)                                                                             |
|          | 701±200ns            | 701±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 255.5 (1), 0.5)                                                                              |
|          | 701±200ns            | 701±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 255.5 (1), 1.0)                                                                              |
|          | 666±200ns            | 666±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 511.0, 0.0)                                                                                  |
|          | 682±200ns            | 682±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 511.0, 0.25)                                                                                 |
|          | 736±200ns            | 736±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 511.0, 0.5)                                                                                  |
|          | 727±200ns            | 727±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 511.0, 1.0)                                                                                  |
|          | 691±200ns            | 691±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 5110000000.0, 0.0)                                                                           |
|          | 662±200ns            | 662±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 5110000000.0, 0.25)                                                                          |
|          | 736±200ns            | 736±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 5110000000.0, 0.5)                                                                           |
|          | 712±200ns            | 712±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(1.0, 5110000000.0, 1.0)                                                                           |
|          | 712±200ns            | 712±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 255.5 (0), 0.0)                                                                         |
|          | 677±200ns            | 677±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 255.5 (0), 0.25)                                                                        |
|          | 692±200ns            | 692±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 255.5 (0), 0.5)                                                                         |
|          | 681±200ns            | 681±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 255.5 (0), 1.0)                                                                         |
|          | 641±200ns            | 641±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 255.5 (1), 0.0)                                                                         |
|          | 691±200ns            | 691±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 255.5 (1), 0.25)                                                                        |
|          | 721±200ns            | 721±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 255.5 (1), 0.5)                                                                         |
|          | 711±200ns            | 711±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 255.5 (1), 1.0)                                                                         |
|          | 686±200ns            | 686±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 511.0, 0.0)                                                                             |
|          | 701±200ns            | 701±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 511.0, 0.25)                                                                            |
|          | 671±200ns            | 671±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 511.0, 0.5)                                                                             |
|          | 721±200ns            | 721±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 511.0, 1.0)                                                                             |
|          | 687±200ns            | 687±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 5110000000.0, 0.0)                                                                      |
|          | 711±200ns            | 711±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 5110000000.0, 0.25)                                                                     |
|          | 616±200ns            | 616±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 5110000000.0, 0.5)                                                                      |
|          | 711±200ns            | 711±200ns           |       1 | transport_montecarlo_opacities.BenchmarkMontecarloMontecarloNumbaOpacities.time_photoabsorption_opacity_calculation(100000.0, 5110000000.0, 1.0)                                                                      |
|          | 681±200ns            | 681±200ns           |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_calculate_distance_electron({'electron_density': 1.0, 'tua_event': 10000000000.0})                                                          |
|          | 711±200ns            | 711±200ns           |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_calculate_distance_electron({'electron_density': 1e-05, 'tua_event': 10000000000.0})                                                        |
|          | 671±200ns            | 671±200ns           |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_calculate_tau_electron({'electron_density': -1, 'distance': 0})                                                                             |
|          | 706±300ns            | 706±300ns           |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_calculate_tau_electron({'electron_density': -10000000000.0, 'distance': -10000000000.0})                                                    |
|          | 711±200ns            | 711±200ns           |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_calculate_tau_electron({'electron_density': 10000000000.0, 'distance': 10000000000.0})                                                      |
|          | 746±200ns            | 746±200ns           |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_calculate_tau_electron({'electron_density': 1e-05, 'distance': 1.0})                                                                        |
|          | 356±80ns             | 356±80ns            |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_get_random_mu                                                                                                                               |
|          | 2.17±0s              | 2.17±0s             |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_emitted({'current_shell_id': 132, 'delta_shell': 1, 'no_of_shells': 133})                                 |
|          | 2.20±0s              | 2.20±0s             |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_emitted({'current_shell_id': 132, 'delta_shell': 11, 'no_of_shells': 132})                                |
|          | 2.19±0.01s           | 2.19±0.01s          |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_emitted({'current_shell_id': 132, 'delta_shell': 2, 'no_of_shells': 133})                                 |
|          | 2.21±0s              | 2.21±0s             |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_increment({'current_shell_id': 132, 'delta_shell': -1, 'no_of_shells': 199})                              |
|          | 2.22±0s              | 2.22±0s             |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_increment({'current_shell_id': 132, 'delta_shell': 0, 'no_of_shells': 132})                               |
|          | 2.18±0.01s           | 2.18±0.01s          |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_increment({'current_shell_id': 132, 'delta_shell': 20, 'no_of_shells': 154})                              |
|          | 2.14±0.01s           | 2.14±0.01s          |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_reabsorbed({'current_shell_id': -133, 'delta_shell': -133, 'no_of_shells': -1000000000.0})                |
|          | 2.16±0.01s           | 2.16±0.01s          |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_reabsorbed({'current_shell_id': 132, 'delta_shell': 132, 'no_of_shells': 132})                            |
|          | 2.18±0s              | 2.18±0s             |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_move_packet_across_shell_boundary_reabsorbed({'current_shell_id': 132, 'delta_shell': 133, 'no_of_shells': 133})                            |
|          | 37.4±4μs             | 37.4±4μs            |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_update_line_estimators({'cur_line_id': 0, 'distance_trace': 0, 'time_explosion': 52000000.0, 'enable_full_relativity': True})               |
|          | 37.6±4μs             | 37.6±4μs            |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_update_line_estimators({'cur_line_id': 0, 'distance_trace': 1000000000000.0, 'time_explosion': 52000000.0, 'enable_full_relativity': True}) |
|          | 38.6±4μs             | 38.6±4μs            |       1 | transport_montecarlo_packet.BenchmarkMontecarloMontecarloNumbaPacket.time_update_line_estimators({'cur_line_id': 1, 'distance_trace': 100000.0, 'time_explosion': 10000000000.0, 'enable_full_relativity': False})    |
|          | 1.47±0.01s           | 1.47±0.01s          |       1 | transport_montecarlo_r_packet.BenchmarkMontecarloMontecarloNumbaRPacket.time_rpacket_trackers_to_dataframe                                                                                                            |
|          | 7.03±0.03s           | 7.03±0.03s          |       1 | transport_montecarlo_single_packet_loop.BenchmarkMontecarloMontecarloNumbaVpacket.time_single_packet_loop                                                                                                             |
|          | 6.43±0s              | 6.43±0s             |       1 | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_bad_vpacket                                                                                                                         |
|          | 6.34±0.02s           | 6.34±0.02s          |       1 | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_vpacket                                                                                                                             |
|          | 5.73±0.04s           | 5.73±0.04s          |       1 | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_vpacket_volley({'tau_russian': 10.0, 'survival_possibility': 0.0})                                                                  |
|          | 5.67±0s              | 5.67±0s             |       1 | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_vpacket_volley({'tau_russian': 15.0, 'survival_possibility': 0.1})                                                                  |
|          | 4.95±0.01s           | 4.95±0.01s          |       1 | transport_montecarlo_vpacket.BenchmarkMontecarloMontecarloNumbaVpacket.time_trace_vpacket_within_shell                                                                                                                |

If you want to see the graph of the results, you can check it here

tardis-bot · 2024-06-21T16:19:00Z

*beep* *bop*

Hi, human.

The docs workflow has succeeded ✔️

Click here to see your results.

jvshields · 2024-07-09T19:31:03Z

tardis/energy_input/gamma_ray_channel.py

+        decayed_isotope_mass_fraction = IsotopicMassFraction(
+            initial_isotope_mass_fraction
+        ).decay(time)
+        isotope_mass_fraction_list.append(decayed_isotope_mass_fraction)


Appending to arrays is bad for computer memory because you have to reallocate memory to change the size of the array. It's much better to initialize isotope_mass_fraction_list as an empty list with the appropriate size, something line len(time_array)

Please address this comment @Knights-Templars

jvshields · 2024-07-09T20:29:49Z

tardis/energy_input/gamma_ray_packet_source.py

@@ -737,36 +828,36 @@ def create_packets(

        # sample radii at time = 0
        initial_radii = self.create_packet_radii(sampled_packets_df)
+        # sample decay times
+        sampled_times = (
+            sampled_packets_df.index.get_level_values("time") * 86400.0


This could be a constant defined before called DAYS_TO_SECONDS or something like that

Please address this comment @Knights-Templars

codecov · 2024-07-16T13:41:07Z

Codecov Report

Attention: Patch coverage is 5.55556% with 323 lines in your changes missing coverage. Please review.

Project coverage is 36.55%. Comparing base (e88a31a) to head (7b123f8).
Report is 23 commits behind head on master.

Files	Patch %	Lines
tardis/model/parse_input.py	0.00%	170 Missing ⚠️
...ardis/energy_input/tests/test_gamma_ray_channel.py	9.43%	48 Missing ⚠️
tardis/energy_input/main_gamma_ray_loop.py	7.69%	36 Missing ⚠️
tardis/energy_input/gamma_ray_channel.py	11.53%	23 Missing ⚠️
tardis/energy_input/gamma_ray_packet_source.py	4.54%	21 Missing ⚠️
tardis/energy_input/util.py	13.63%	19 Missing ⚠️
tardis/energy_input/gamma_packet_loop.py	44.44%	5 Missing ⚠️
tardis/energy_input/gamma_ray_transport.py	0.00%	1 Missing ⚠️

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HEAD has 1 upload less than BASE

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Additional details and impacted files

@@             Coverage Diff             @@
##           master    #2601       +/-   ##
===========================================
- Coverage   69.25%   36.55%   -32.70%     
===========================================
  Files         179      187        +8     
  Lines       14262    15072      +810     
===========================================
- Hits         9877     5510     -4367     
- Misses       4385     9562     +5177

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andrewfullard · 2024-07-22T21:04:51Z

tardis/energy_input/gamma_packet_loop.py


-    deposition_estimator = np.zeros_like(energy_df_rows)
+    print("Packet count:", packet_count)


Is this still needed? Could it be a logging command?

andrewfullard · 2024-07-22T21:06:06Z

tardis/energy_input/gamma_ray_channel.py

+        decayed_isotope_mass_fraction = IsotopicMassFraction(
+            initial_isotope_mass_fraction
+        ).decay(time)
+        isotope_mass_fraction_list.append(decayed_isotope_mass_fraction)


Please address this comment @Knights-Templars

andrewfullard · 2024-07-22T21:06:39Z

tardis/energy_input/gamma_ray_channel.py

+        inventories = create_inventories_dict(isotope_dict)
+        total_decays = calculate_total_decays(inventories, time)
+        isotope_df_time = create_isotope_decay_df(total_decays, gamma_ray_lines)
+        isotope_decay_df_list.append(isotope_df_time)


See Josh's previous comment on appending

andrewfullard · 2024-07-22T21:07:36Z

tardis/energy_input/util.py

+
+
+def make_isotope_string_tardis_like(isotope_dict):
+    """Converts isotope string to TARDIS format


Define the TARDIS format here (and in docs)

andrewfullard · 2024-07-22T21:07:57Z

tardis/model/parse_input.py

This file should not exist

Added decay of abundances with time

56d8f44

Knights-Templars marked this pull request as draft April 24, 2024 20:20

Knights-Templars added gamma-ray work in progress 🚧 labels Apr 24, 2024

Knights-Templars added 9 commits May 3, 2024 11:20

Adding dataframe to gammaraypacketsource

ddb44a2

Added a rejection sampling into decay times

28f4554

Changed gamma ray grid

64ab1f0

modified the input to gammaraypacketsource

6fb737c

Added dataframe for storing packet info

cc9fe35

Merged

88f7ea4

Checked with black

b523946

added tests for total decay energy

14ab57e

removing accessing any variables in plasma

0a3a178

Knights-Templars added build-docs benchmarks labels Jun 21, 2024

Knights-Templars changed the title ~~Added decay of abundances with time~~ Gamma ray spectrum from packet dataframe Jun 24, 2024

Knights-Templars added 2 commits June 24, 2024 15:24

done some formatiing and changed what will come out as output

2089567

Cleanup

4b9dba4

Knights-Templars requested review from andrewfullard and wkerzendorf June 24, 2024 20:36

Knights-Templars marked this pull request as ready for review June 24, 2024 20:36

Knights-Templars removed the build-docs label Jun 24, 2024

Knights-Templars added 5 commits June 24, 2024 16:47

Resolved conflicts

c56cddc

Fixed black issues

f24a2c9

Changed sampling of time to uniform time

12a72f4

Uniform time sampling between adjacent time steps

2215b88

decay times from decaying dataframe

ef3cd6a

jvshields reviewed Jul 9, 2024

View reviewed changes

corrected the total number of decays

4c027f5

Knights-Templars added 3 commits July 17, 2024 10:38

Added tests for cumulative decays

960f2b8

Added test for time evolution of decays as the composition changes

6161f6a

Ran black

7b123f8

andrewfullard requested changes Jul 22, 2024

View reviewed changes

Merge branch 'tardis-sn:master' into gammaraypacketsourcedata

5fb9903

Knights-Templars marked this pull request as draft July 29, 2024 17:42

Knights-Templars closed this Aug 2, 2024

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Gamma ray spectrum from packet dataframe #2601

Gamma ray spectrum from packet dataframe #2601

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		deposition_estimator = np.zeros_like(energy_df_rows)
		print("Packet count:", packet_count)



		def make_isotope_string_tardis_like(isotope_dict):
		"""Converts isotope string to TARDIS format

Gamma ray spectrum from packet dataframe #2601

Gamma ray spectrum from packet dataframe #2601

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