Merge pull request #114 from templateflow/oesteban-patch-2 #278
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| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Python package | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: [ master ] | |
| tags: [ '*' ] | |
| pull_request: | |
| branches: [ master ] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: | |
| contents: read | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| version: ${{ steps.get_version.outputs.version }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3 | |
| - uses: actions/cache@v4 | |
| with: | |
| path: ~/.cache/pip | |
| key: pip-cache-v1 | |
| restore-keys: | | |
| pip-cache- | |
| - run: pip install --upgrade build twine | |
| - name: Build sdist and wheel | |
| run: python -m build | |
| - run: twine check dist/* | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: dist | |
| path: dist/ | |
| - name: Interpolate version in confined environment | |
| id: get_version | |
| run: | | |
| python -m venv /tmp/buildenv | |
| source /tmp/buildenv/bin/activate | |
| python -m pip install --upgrade setuptools setuptools_scm nipreps-versions | |
| if [[ "$GITHUB_REF" == refs/tags/* ]]; then | |
| TAG=${GITHUB_REF##*/} | |
| fi | |
| THISVERSION=$( python -m setuptools_scm ) | |
| THISVERSION=${TAG:-$THISVERSION} | |
| echo "Expected VERSION: \"${THISVERSION}\"" | |
| echo "version=${THISVERSION}" >> $GITHUB_OUTPUT | |
| test-install: | |
| runs-on: ubuntu-latest | |
| needs: build | |
| strategy: | |
| matrix: | |
| python-version: ['3.8', '3.9', '3.10', '3.11', '3.12'] | |
| mode: ['wheel'] | |
| include: | |
| - {python-version: '3.11', mode: 'repo'} | |
| - {python-version: '3.11', mode: 'sdist'} | |
| - {python-version: '3.11', mode: 'editable'} | |
| env: | |
| TEMPLATEFLOW_HOME: /tmp/home | |
| THISVERSION: ${{ needs.build.outputs.version }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| if: matrix.mode == 'repo' || matrix.mode == 'editable' | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/download-artifact@v4 | |
| if: matrix.mode == 'sdist' || matrix.mode == 'wheel' | |
| with: | |
| name: dist | |
| path: /tmp/package/ | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: actions/cache@v4 | |
| with: | |
| path: ~/.cache/pip | |
| key: pip-cache-v1 | |
| restore-keys: | | |
| pip-cache- | |
| - name: Upgrade pip | |
| run: pip install --upgrade pip wheel | |
| - name: Set install command | |
| run: | | |
| case ${{ matrix.mode }} in | |
| repo) | |
| echo "TARGET=." >> $GITHUB_ENV | |
| ;; | |
| editable) | |
| echo "TARGET=-e ." >> $GITHUB_ENV | |
| ;; | |
| sdist) | |
| echo "TARGET=$( ls /tmp/package/templateflow*.tar.gz )" >> $GITHUB_ENV | |
| ;; | |
| wheel) | |
| echo "TARGET=$( ls /tmp/package/templateflow*.whl )" >> $GITHUB_ENV | |
| ;; | |
| esac | |
| - name: Install and check version | |
| run: | | |
| pip install $TARGET | |
| INSTALLED_VERSION=$(python -c 'import templateflow as tf; print(tf.__version__, end="")') | |
| echo "VERSION: \"${THISVERSION}\"" | |
| echo "INSTALLED: \"${INSTALLED_VERSION}\"" | |
| test "${INSTALLED_VERSION}" = "${THISVERSION}" | |
| - name: Re-install | |
| run: | | |
| pip install $TARGET --force-reinstall | |
| find ${TEMPLATEFLOW_HOME} >> /tmp/.install.txt | |
| - name: Re-install [missing template] | |
| run: | | |
| rm -rf ${TEMPLATEFLOW_HOME}/tpl-MNI152NLin2009cAsym | |
| pip install $TARGET --force-reinstall | |
| python -c "import templateflow; templateflow.update(overwrite=False)" | |
| find ${TEMPLATEFLOW_HOME} >> /tmp/.install-2.txt | |
| diff /tmp/.install.txt /tmp/.install-2.txt | |
| exit $? |