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Bug-fix release: Origin bounds check bug in BeastTreeFromMaster

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@tgvaughan tgvaughan released this 19 Sep 10:52
· 16 commits to master since this release

The BeastTreeFromMaster simulation type allows one to provide a RealParameter to the input "origin" which is then set to the time before the most recent sample of the simulated tree. Previously, the code which initialized this value was using an approach that had the side-effect of the lower and upper bounds of the initialized RealParameter being set to zero. This made the parameter inoperable, in the sense that any ScaleOperator proposal would be immediately rejected due to violation of the bounds.

This patch fixes this problem.

As always, MASTER-x.y.z.zip is the standalone distribution (no BEAST required), while MASTER.package.vx.y.z.zip is the BEAST package (installable via BEAUti's package manager).