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updated docker img for mapping
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tiagofilipe12 committed May 28, 2018
1 parent 77f6240 commit 37a7ce2
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions docker-images/mapping/Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -40,10 +40,10 @@ ENV PATH="/ngstools/bin/samtools-1.7:$PATH"

WORKDIR /ngstools/data/

RUN wget https://github.com/tiagofilipe12/PlasmidCoverage/releases/download/v1.1.1/indexes.tar.gz
RUN wget https://github.com/tiagofilipe12/PlasmidCoverage/releases/download/v1.1.2/indexes.tar.gz

RUN tar xvzf indexes.tar.gz

# Fetches json with lenghts used to generate -k parameter for bowtie as well as
# plasmid lenghts
RUN wget https://github.com/tiagofilipe12/PlasmidCoverage/releases/download/v1.1.1/reads_sample_result_length.json
RUN wget https://github.com/tiagofilipe12/PlasmidCoverage/releases/download/v1.1.2/reads_sample_result_length.json

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